The 2.0 version of rSNPBase

Variant report

Variant rs1225601
Chromosome Location chr6:28134242-28134243
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:28129800-28138800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr6:28129800-28142200 Weak transcription Aorta Aorta
3 chr6:28129800-28145400 Weak transcription Brain Angular Gyrus brain
4 chr6:28130000-28136000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr6:28130000-28136200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:28130000-28136800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr6:28130000-28139000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr6:28130000-28141400 Weak transcription Right Ventricle heart
9 chr6:28130000-28142600 Weak transcription Brain Hippocampus Middle brain
10 chr6:28130200-28134400 Weak transcription Liver Liver
11 chr6:28130200-28134400 Weak transcription Osteobl bone
12 chr6:28130200-28134600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr6:28130200-28134600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr6:28130200-28134600 Weak transcription HSMMtube muscle
15 chr6:28130200-28135400 Weak transcription Primary B cells from peripheral blood blood
16 chr6:28130200-28136200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr6:28130200-28137400 Weak transcription Brain Cingulate Gyrus brain
18 chr6:28130200-28137600 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr6:28130200-28138600 Weak transcription Primary B cells from cord blood blood
20 chr6:28130200-28138600 Weak transcription Brain Anterior Caudate brain
21 chr6:28130200-28139200 Weak transcription Fetal Brain Female brain
22 chr6:28130200-28140600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr6:28130200-28141800 Weak transcription Fetal Kidney kidney
24 chr6:28130200-28142800 Weak transcription Left Ventricle heart
25 chr6:28130400-28134400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:28130400-28139200 Weak transcription Adipose Nuclei Adipose
27 chr6:28130400-28140200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:28130400-28140800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr6:28130400-28142600 Weak transcription Psoas Muscle Psoas
30 chr6:28130600-28139000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:28130600-28139200 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr6:28130600-28139600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr6:28130600-28139800 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr6:28130600-28141800 Weak transcription Stomach Smooth Muscle stomach
35 chr6:28131200-28135800 Weak transcription K562 blood
36 chr6:28133200-28139600 Weak transcription Fetal Muscle Leg muscle
37 chr6:28133600-28140800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr6:28134200-28135600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015