The 2.0 version of rSNPBase

Variant report

Variant rs59319360
Chromosome Location chr13:80025424-80025425
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:80010200-80025600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr13:80016200-80025800 Weak transcription H1 Cell Line embryonic stem cell
3 chr13:80020600-80034000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr13:80020800-80025600 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr13:80020800-80025600 Weak transcription Fetal Thymus thymus
6 chr13:80021000-80025800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr13:80022200-80026000 Enhancers Primary T helper cells PMA-I stimulated --
8 chr13:80022200-80026000 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr13:80022200-80026600 Enhancers Primary T helper naive cells from peripheral blood blood
10 chr13:80022400-80026000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr13:80022400-80027200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr13:80022800-80025800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr13:80023200-80025600 Weak transcription GM12878-XiMat blood
14 chr13:80024200-80025600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr13:80024400-80025600 Weak transcription Primary T cells fromperipheralblood blood
16 chr13:80025200-80027200 Enhancers Primary T helper cells fromperipheralblood blood
17 chr13:80025400-80025600 Enhancers Pancreatic Islets Pancreatic Islet
18 chr13:80025400-80025600 Flanking Active TSS K562 blood
19 chr13:80025400-80026000 Enhancers Muscle Satellite Cultured Cells --
20 chr13:80025400-80026200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr13:80025400-80026200 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr13:80025400-80026400 Flanking Active TSS Dnd41 blood
23 chr13:80025400-80026400 Enhancers HUVEC blood vessel
24 chr13:80025400-80026400 Enhancers NHEK skin
25 chr13:80025400-80026600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr13:80025400-80026600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
27 chr13:80025400-80026600 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr13:80025400-80026600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr13:80025400-80026600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr13:80025400-80026600 Enhancers NHDF-Ad bronchial
31 chr13:80025400-80026800 Enhancers HUES64 Cell Line embryonic stem cell
32 chr13:80025400-80026800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr13:80025400-80026800 Enhancers Primary T cells from cord blood blood
34 chr13:80025400-80026800 Enhancers Primary T regulatory cells fromperipheralblood blood
35 chr13:80025400-80026800 Enhancers NH-A brain
36 chr13:80025400-80026800 Enhancers NHLF lung
37 chr13:80025400-80026800 Enhancers Osteobl bone
38 chr13:80025400-80027000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr13:80025400-80027000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr13:80025400-80027000 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr13:80025400-80027000 Enhancers Primary T killer memory cells from peripheral blood blood
42 chr13:80025400-80027000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr13:80025400-80027000 Enhancers HSMM muscle
44 chr13:80025400-80027600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015