The 2.0 version of rSNPBase

Variant report

Variant rs7985291
Chromosome Location chr13:80097294-80097295
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:80066800-80122800 Weak transcription Esophagus oesophagus
2 chr13:80076000-80099200 Weak transcription Hela-S3 cervix
3 chr13:80078000-80097800 Weak transcription Ovary ovary
4 chr13:80078200-80102000 Weak transcription Right Ventricle heart
5 chr13:80079600-80098200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr13:80082800-80108000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr13:80083000-80120000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr13:80083000-80122800 Weak transcription Stomach Mucosa stomach
9 chr13:80086800-80098400 Weak transcription Brain Substantia Nigra brain
10 chr13:80087400-80134000 Weak transcription Aorta Aorta
11 chr13:80087400-80134600 Weak transcription Pancreas Pancrea
12 chr13:80089200-80098800 Weak transcription Brain Angular Gyrus brain
13 chr13:80089400-80097800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr13:80089400-80098800 Weak transcription Brain Anterior Caudate brain
15 chr13:80089400-80098800 Weak transcription Brain Hippocampus Middle brain
16 chr13:80089400-80099200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr13:80089400-80118400 Weak transcription Small Intestine intestine
18 chr13:80090600-80112000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr13:80090800-80103400 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr13:80091000-80099200 Weak transcription K562 blood
21 chr13:80091400-80108000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr13:80091600-80097800 Weak transcription Fetal Heart heart
23 chr13:80091600-80097800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr13:80092200-80109400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr13:80092400-80099200 Weak transcription Brain Cingulate Gyrus brain
26 chr13:80092400-80102000 Weak transcription Colonic Mucosa Colon
27 chr13:80093000-80110200 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr13:80093400-80097800 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr13:80093400-80097800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr13:80093400-80098400 Weak transcription Fetal Muscle Trunk muscle
31 chr13:80093400-80104200 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr13:80093400-80112800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr13:80093600-80098400 Weak transcription Fetal Muscle Leg muscle
34 chr13:80093600-80108200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr13:80093800-80098000 Weak transcription Placenta Amnion Placenta Amnion
36 chr13:80093800-80099000 Weak transcription A549 lung
37 chr13:80093800-80104400 Weak transcription H9 Cell Line embryonic stem cell
38 chr13:80093800-80109800 Weak transcription H1 Cell Line embryonic stem cell
39 chr13:80094800-80097600 Weak transcription Brain Germinal Matrix brain
40 chr13:80094800-80098800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr13:80095000-80098000 Strong transcription Stomach Smooth Muscle stomach
42 chr13:80095000-80098600 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr13:80095000-80098600 Strong transcription Placenta Placenta
44 chr13:80095000-80099200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr13:80095000-80099600 Strong transcription Adipose Nuclei Adipose
46 chr13:80095000-80099800 Strong transcription Duodenum Mucosa Duodenum
47 chr13:80095000-80100400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr13:80095000-80100600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr13:80095000-80101800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr13:80095000-80102800 Strong transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015