Variant report

Variant	rs59365117
Chromosome Location	chr9:94320279-94320280
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10512214	1.00[AMR][1000 genomes]
rs11998997	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12001678	1.00[AMR][1000 genomes]
rs12001758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12003741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16907588	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16907602	1.00[AMR][1000 genomes]
rs35764413	1.00[AMR][1000 genomes]
rs4381076	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56091954	1.00[AMR][1000 genomes]
rs56227711	1.00[AMR][1000 genomes]
rs57006470	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57412003	1.00[AMR][1000 genomes]
rs60009660	1.00[AMR][1000 genomes]
rs60217100	1.00[AMR][1000 genomes]
rs60341050	1.00[AMR][1000 genomes]
rs61094317	1.00[AMR][1000 genomes]
rs7026091	1.00[AMR][1000 genomes]
rs73494674	1.00[AMR][1000 genomes]
rs73496706	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496717	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496726	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496729	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496737	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73496743	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73513020	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73513032	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73513043	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73513061	1.00[AMR][1000 genomes]
rs73513068	1.00[AMR][1000 genomes]
rs73515039	1.00[AMR][1000 genomes]
rs73521420	1.00[AMR][1000 genomes]
rs73521430	1.00[AMR][1000 genomes]
rs7873653	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3332537	chr9:94298446-94327291	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94319400-94321000	Enhancers	Fetal Lung	lung
2	chr9:94319600-94320400	Enhancers	Stomach Smooth Muscle	stomach
3	chr9:94320000-94320600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr9:94320000-94320600	Enhancers	Placenta Amnion	Placenta Amnion
5	chr9:94320200-94320800	Enhancers	Colon Smooth Muscle	Colon

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