Variant report
| Variant | rs73515039 |
|---|---|
| Chromosome Location | chr9:94350174-94350175 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000233081 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10512214 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11998997 | 1.00[AMR][1000 genomes] |
| rs12001172 | 1.00[AMR][1000 genomes] |
| rs12001678 | 1.00[AMR][1000 genomes] |
| rs12001758 | 1.00[AMR][1000 genomes] |
| rs12003706 | 1.00[AMR][1000 genomes] |
| rs12003741 | 1.00[AMR][1000 genomes] |
| rs16907588 | 1.00[AMR][1000 genomes] |
| rs16907602 | 1.00[AMR][1000 genomes] |
| rs35764413 | 1.00[AMR][1000 genomes] |
| rs4381076 | 1.00[AMR][1000 genomes] |
| rs56091954 | 1.00[AMR][1000 genomes] |
| rs56227711 | 1.00[AMR][1000 genomes] |
| rs57006470 | 1.00[AMR][1000 genomes] |
| rs57412003 | 1.00[AMR][1000 genomes] |
| rs59365117 | 1.00[AMR][1000 genomes] |
| rs60009660 | 1.00[AMR][1000 genomes] |
| rs60217100 | 1.00[AMR][1000 genomes] |
| rs60341050 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs61094317 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs6479372 | 1.00[AMR][1000 genomes] |
| rs6479373 | 1.00[AMR][1000 genomes] |
| rs7026091 | 1.00[AMR][1000 genomes] |
| rs73494674 | 1.00[AMR][1000 genomes] |
| rs73496706 | 1.00[AMR][1000 genomes] |
| rs73496717 | 1.00[AMR][1000 genomes] |
| rs73496726 | 1.00[AMR][1000 genomes] |
| rs73496729 | 1.00[AMR][1000 genomes] |
| rs73496737 | 1.00[AMR][1000 genomes] |
| rs73496741 | 1.00[AMR][1000 genomes] |
| rs73496743 | 1.00[AMR][1000 genomes] |
| rs73513020 | 1.00[AMR][1000 genomes] |
| rs73513032 | 1.00[AMR][1000 genomes] |
| rs73513043 | 1.00[AMR][1000 genomes] |
| rs73513061 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73513068 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73521420 | 1.00[AMR][1000 genomes] |
| rs73521430 | 1.00[AMR][1000 genomes] |
| rs7863502 | 1.00[AMR][1000 genomes] |
| rs7873653 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3402084 | chr9:94349581-94351829 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:94347800-94351200 | Weak transcription | Spleen | Spleen |
| 2 | chr9:94349200-94351400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
