Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11961294	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11967305	1.00[AMR][1000 genomes]
rs11967533	1.00[AMR][1000 genomes]
rs11970259	0.84[ASN][1000 genomes]
rs17187896	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17188050	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17188127	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17188268	0.84[ASN][1000 genomes]
rs17194209	1.00[AMR][1000 genomes]
rs3094060	0.84[ASN][1000 genomes]
rs3094061	0.84[ASN][1000 genomes]
rs3094627	0.84[ASN][1000 genomes]
rs3130374	0.84[ASN][1000 genomes]
rs3130375	0.84[ASN][1000 genomes]
rs3132649	0.84[ASN][1000 genomes]
rs58065720	0.84[ASN][1000 genomes]
rs59152891	0.84[ASN][1000 genomes]
rs59979159	0.84[ASN][1000 genomes]
rs73420413	1.00[AMR][1000 genomes]
rs73425422	0.84[ASN][1000 genomes]
rs73425443	0.84[ASN][1000 genomes]
rs73426399	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73726125	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv884057	chr6:30140540-30149251	ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Enhancers Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30139000-30152000	Weak transcription	Liver	Liver
2	chr6:30141200-30146200	Weak transcription	HepG2	liver
3	chr6:30142000-30149200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr6:30145000-30173800	Weak transcription	Right Atrium	heart

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