Variant report

Variant rs11961294
Chromosome Location chr6:30180280-30180281
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30174600-30180400 Enhancers Small Intestine intestine
2 chr6:30175800-30180400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr6:30175800-30180400 Weak transcription Fetal Muscle Trunk muscle
4 chr6:30175800-30180600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:30176200-30180600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr6:30176200-30180600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:30178000-30180400 Flanking Active TSS Duodenum Mucosa Duodenum
8 chr6:30178400-30180600 Weak transcription Pancreas Pancrea
9 chr6:30178600-30180400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr6:30178800-30180400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:30178800-30180600 Flanking Active TSS Liver Liver
12 chr6:30179000-30180400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:30179200-30180400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
14 chr6:30179200-30180600 Flanking Active TSS HUVEC blood vessel
15 chr6:30179200-30180600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
16 chr6:30179400-30180400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr6:30179400-30180400 Enhancers Primary neutrophils fromperipheralblood blood
18 chr6:30179400-30180400 Weak transcription Left Ventricle heart
19 chr6:30179400-30180400 Flanking Active TSS Dnd41 blood
20 chr6:30179400-30181400 Active TSS GM12878-XiMat blood
21 chr6:30179400-30182400 Active TSS Fetal Intestine Small intestine
22 chr6:30179600-30180400 Flanking Active TSS Muscle Satellite Cultured Cells --
23 chr6:30179600-30180400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
24 chr6:30179600-30180400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
25 chr6:30179600-30180400 Flanking Active TSS Rectal Smooth Muscle rectum
26 chr6:30179600-30180400 Flanking Active TSS Hela-S3 cervix
27 chr6:30179600-30180600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:30179600-30180600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
29 chr6:30179600-30180600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:30179600-30180600 Flanking Active TSS Colon Smooth Muscle Colon
31 chr6:30179600-30180800 Flanking Active TSS Primary T cells from cord blood blood
32 chr6:30179600-30180800 Flanking Active TSS Adipose Nuclei Adipose
33 chr6:30179600-30181000 Flanking Active TSS Primary B cells from cord blood blood
34 chr6:30179600-30181000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:30179600-30181400 Active TSS Fetal Muscle Leg muscle
36 chr6:30179600-30182200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
37 chr6:30179600-30182400 Active TSS Esophagus oesophagus
38 chr6:30179800-30180400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
39 chr6:30179800-30180400 Flanking Active TSS Brain Angular Gyrus brain
40 chr6:30179800-30180400 Flanking Active TSS Brain Anterior Caudate brain
41 chr6:30179800-30180400 Flanking Active TSS Fetal Brain Female brain
42 chr6:30179800-30180400 Flanking Active TSS Fetal Heart heart
43 chr6:30179800-30180400 Enhancers Placenta Amnion Placenta Amnion
44 chr6:30179800-30180400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
45 chr6:30179800-30180600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
46 chr6:30179800-30180600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
47 chr6:30179800-30180600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr6:30179800-30180600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
49 chr6:30179800-30180600 Flanking Active TSS Fetal Brain Male brain
50 chr6:30179800-30180600 Flanking Active TSS Osteobl bone

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