Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17104612	1.00[EUR][1000 genomes]
rs17104633	1.00[EUR][1000 genomes]
rs1940963	1.00[EUR][1000 genomes]
rs55735711	1.00[EUR][1000 genomes]
rs55798897	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55855997	1.00[EUR][1000 genomes]
rs56020310	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56236586	1.00[EUR][1000 genomes]
rs56671885	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs56739822	1.00[EUR][1000 genomes]
rs57646416	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59127463	1.00[EUR][1000 genomes]
rs59214931	1.00[EUR][1000 genomes]
rs59332515	1.00[EUR][1000 genomes]
rs59575138	0.86[EUR][1000 genomes]
rs59852620	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60241016	1.00[EUR][1000 genomes]
rs60507310	1.00[EUR][1000 genomes]
rs60909500	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60984319	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61601618	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7129285	1.00[EUR][1000 genomes]
rs73630113	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1053687	chr11:105513034-105595722	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv832256	chr11:105516593-105689326	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105524200-105556800	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr11:105537200-105540200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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