Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:105648714..105650582-chr11:105651736..105654609,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs17104612	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17104633	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1940963	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55735711	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55798897	1.00[EUR][1000 genomes]
rs55855997	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56020310	1.00[EUR][1000 genomes]
rs56236586	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56671885	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56739822	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57646416	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57721191	0.85[AMR][1000 genomes]
rs59127463	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59214931	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59397309	1.00[EUR][1000 genomes]
rs59575138	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs59852620	1.00[EUR][1000 genomes]
rs60241016	1.00[EUR][1000 genomes]
rs60507310	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60909500	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60984319	1.00[EUR][1000 genomes]
rs61601618	1.00[EUR][1000 genomes]
rs7129285	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73630113	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832256	chr11:105516593-105689326	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv1829261	chr11:105614894-105698982	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv898357	chr11:105614894-105709856	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:105634600-105653800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr11:105651800-105653400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr11:105651800-105653600	Weak transcription	Brain Cingulate Gyrus	brain
4	chr11:105651800-105653800	Enhancers	Brain Angular Gyrus	brain
5	chr11:105652000-105653200	Weak transcription	Brain Substantia Nigra	brain
6	chr11:105652000-105653400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:105652200-105657400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr11:105652400-105653600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:105652600-105657200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr11:105652600-105657400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr11:105652800-105653800	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr11:105652800-105654600	Weak transcription	Brain Germinal Matrix	brain
13	chr11:105653000-105653600	Enhancers	Brain Anterior Caudate	brain
14	chr11:105653000-105654800	Enhancers	Brain Hippocampus Middle	brain

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