The 2.0 version of rSNPBase

Variant report

Variant rs59546704
Chromosome Location chr9:93961980-93961981
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:93956400-93963200 Enhancers Primary monocytes fromperipheralblood blood
2 chr9:93956600-93962000 Weak transcription Aorta Aorta
3 chr9:93956600-93962600 Enhancers Stomach Mucosa stomach
4 chr9:93956800-93962400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
5 chr9:93956800-93962400 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr9:93957000-93962400 Enhancers Rectal Mucosa Donor 31 rectum
7 chr9:93957600-93962400 Enhancers Skeletal Muscle Female skeletal muscle
8 chr9:93957800-93962000 Weak transcription Primary B cells from peripheral blood blood
9 chr9:93958600-93962400 Enhancers K562 blood
10 chr9:93959000-93962000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr9:93959600-93963000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr9:93959800-93962400 Enhancers Primary neutrophils fromperipheralblood blood
13 chr9:93959800-93969600 Weak transcription Gastric stomach
14 chr9:93960200-93962000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr9:93960200-93962400 Enhancers Sigmoid Colon Sigmoid Colon
16 chr9:93960400-93962400 Enhancers Hela-S3 cervix
17 chr9:93960600-93962000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr9:93960800-93962200 Weak transcription Muscle Satellite Cultured Cells --
19 chr9:93960800-93962400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr9:93960800-93962400 Enhancers Small Intestine intestine
21 chr9:93961000-93962000 Weak transcription NHEK skin
22 chr9:93961000-93962200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr9:93961000-93962600 Enhancers HepG2 liver
24 chr9:93961000-93963000 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr9:93961000-93969400 Weak transcription Osteobl bone
26 chr9:93961000-93969800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr9:93961200-93962000 Weak transcription Duodenum Mucosa Duodenum
28 chr9:93961200-93962200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr9:93961200-93962200 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr9:93961200-93964800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr9:93961200-93965000 Weak transcription Fetal Lung lung
32 chr9:93961200-93969200 Weak transcription Liver Liver
33 chr9:93961200-93969600 Weak transcription Right Atrium heart
34 chr9:93961200-93975600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr9:93961400-93962400 Enhancers Pancreas Pancrea
36 chr9:93961800-93962000 Weak transcription Esophagus oesophagus
37 chr9:93961800-93962000 Enhancers Spleen Spleen
38 chr9:93961800-93962400 Enhancers Psoas Muscle Psoas
39 chr9:93961800-93962400 Enhancers HMEC breast
40 chr9:93961800-93962400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
41 chr9:93961800-93962400 Enhancers NHLF lung

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Last update: Aug 31, 2015