The 2.0 version of rSNPBase

Variant report

Variant rs59654654
Chromosome Location chr6:87922383-87922384
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:87868000-87933000 Weak transcription Hela-S3 cervix
2 chr6:87874400-87924200 Weak transcription Fetal Kidney kidney
3 chr6:87879800-87923000 Weak transcription Esophagus oesophagus
4 chr6:87881400-87926200 Weak transcription Liver Liver
5 chr6:87883400-87926200 Weak transcription Fetal Lung lung
6 chr6:87884000-87964400 Weak transcription NHEK skin
7 chr6:87888200-87964200 Weak transcription HSMMtube muscle
8 chr6:87889800-87926400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr6:87890800-87933000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:87891000-87956000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr6:87891200-87929200 Weak transcription Thymus Thymus
12 chr6:87891400-87932600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr6:87892000-87923000 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr6:87894800-87924200 Weak transcription Adipose Nuclei Adipose
15 chr6:87894800-87926200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:87895800-87924000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr6:87896000-87932800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr6:87896400-87925600 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr6:87896400-87926000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr6:87896400-87927400 Weak transcription HMEC breast
21 chr6:87896400-87927800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:87896600-87923200 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr6:87896600-87925600 Weak transcription HSMM muscle
24 chr6:87905200-87950200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:87906200-87956200 Weak transcription A549 lung
26 chr6:87906400-87964400 Weak transcription NHLF lung
27 chr6:87907400-87930800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr6:87907800-87929200 Weak transcription Fetal Muscle Trunk muscle
29 chr6:87909000-87928400 Weak transcription Duodenum Mucosa Duodenum
30 chr6:87909000-87929800 Weak transcription Muscle Satellite Cultured Cells --
31 chr6:87910200-87934400 Weak transcription Fetal Brain Male brain
32 chr6:87910400-87922400 Weak transcription Brain Germinal Matrix brain
33 chr6:87910400-87922600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr6:87910400-87923200 Weak transcription Fetal Brain Female brain
35 chr6:87910600-87956000 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr6:87910800-87926000 Weak transcription Osteobl bone
37 chr6:87910800-87932800 Weak transcription Aorta Aorta
38 chr6:87911000-87925600 Weak transcription Primary monocytes fromperipheralblood blood
39 chr6:87911200-87926000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:87913200-87925200 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr6:87913600-87923000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr6:87913600-87923000 Weak transcription Pancreas Pancrea
43 chr6:87913600-87923000 Weak transcription Right Ventricle heart
44 chr6:87913600-87932800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr6:87913600-87932800 Weak transcription Lung lung
46 chr6:87913600-87934800 Weak transcription Spleen Spleen
47 chr6:87913800-87922600 Weak transcription Fetal Intestine Small intestine
48 chr6:87915200-87925800 Weak transcription HUVEC blood vessel
49 chr6:87915200-87929200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr6:87915400-87922800 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015