Variant report

Variant	rs59751170
Chromosome Location	chr5:41495843-41495844
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10462022	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10941542	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12517050	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12518582	0.98[ASN][1000 genomes]
rs12521712	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12655176	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16871412	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16871449	0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs17207595	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2859816	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs318019	0.99[ASN][1000 genomes]
rs318020	0.99[ASN][1000 genomes]
rs3851440	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3851441	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3851442	0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs3913717	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3913718	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3913719	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3913720	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4559040	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4588635	0.82[AMR][1000 genomes]
rs55803511	0.98[ASN][1000 genomes]
rs56182059	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57159430	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58203282	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6870727	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7703079	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7723565	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3386611	chr5:41494995-41498593	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41486200-41497200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr5:41494400-41504600	Weak transcription	Ovary	ovary
3	chr5:41494800-41496000	Enhancers	Fetal Heart	heart
4	chr5:41495800-41507000	Weak transcription	Left Ventricle	heart

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