The 2.0 version of rSNPBase

Variant report

Variant rs59861752
Chromosome Location chr15:51832675-51832676
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:51776800-51837600 Weak transcription Fetal Thymus thymus
2 chr15:51776800-51855200 Weak transcription Thymus Thymus
3 chr15:51780400-51855800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr15:51780800-51839000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr15:51781400-51863000 Weak transcription HSMM muscle
6 chr15:51781600-51837000 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr15:51787400-51855400 Weak transcription Osteobl bone
8 chr15:51792400-51838400 Weak transcription HSMMtube muscle
9 chr15:51794600-51861000 Weak transcription Gastric stomach
10 chr15:51809000-51854800 Weak transcription Brain Hippocampus Middle brain
11 chr15:51816000-51861000 Weak transcription Pancreas Pancrea
12 chr15:51817000-51837800 Weak transcription Brain Substantia Nigra brain
13 chr15:51817200-51836400 Weak transcription Aorta Aorta
14 chr15:51817800-51862200 Weak transcription Fetal Brain Male brain
15 chr15:51818200-51847600 Weak transcription Rectal Smooth Muscle rectum
16 chr15:51818200-51855400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr15:51818200-51861600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr15:51818400-51853400 Weak transcription Lung lung
19 chr15:51818400-51861200 Weak transcription Fetal Stomach stomach
20 chr15:51818800-51840200 Weak transcription Hela-S3 cervix
21 chr15:51819200-51838200 Weak transcription Colon Smooth Muscle Colon
22 chr15:51819400-51837600 Weak transcription Fetal Muscle Leg muscle
23 chr15:51819400-51852600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr15:51819400-51853400 Weak transcription Ovary ovary
25 chr15:51819600-51853400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr15:51819600-51861400 Weak transcription Fetal Muscle Trunk muscle
27 chr15:51819800-51863000 Weak transcription Right Ventricle heart
28 chr15:51822000-51849400 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr15:51822400-51840000 Strong transcription Primary monocytes fromperipheralblood blood
30 chr15:51823600-51837000 Weak transcription HMEC breast
31 chr15:51824200-51837000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr15:51824400-51854200 Weak transcription Fetal Kidney kidney
33 chr15:51824600-51855000 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr15:51824600-51860600 Weak transcription Brain Anterior Caudate brain
35 chr15:51824600-51861000 Weak transcription Left Ventricle heart
36 chr15:51824800-51836200 Weak transcription Duodenum Mucosa Duodenum
37 chr15:51824800-51863200 Weak transcription Primary hematopoietic stem cells blood
38 chr15:51825000-51845600 Weak transcription Brain Germinal Matrix brain
39 chr15:51825600-51840000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr15:51826000-51853400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr15:51827000-51861600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr15:51827200-51838800 Weak transcription NHLF lung
43 chr15:51827400-51859800 Weak transcription Fetal Intestine Small intestine
44 chr15:51828600-51861200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr15:51828800-51836200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr15:51828800-51868000 Weak transcription Adipose Nuclei Adipose
47 chr15:51828800-51868200 Weak transcription Fetal Intestine Large intestine
48 chr15:51829000-51836200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr15:51829000-51836200 Weak transcription Liver Liver
50 chr15:51829000-51836200 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015