The 2.0 version of rSNPBase

Variant report

Variant rs59904633
Chromosome Location chr18:43841870-43841871
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43825400-43844200 Weak transcription Fetal Brain Female brain
2 chr18:43826600-43847000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr18:43826800-43843600 Weak transcription Brain Germinal Matrix brain
4 chr18:43829200-43842800 Weak transcription Fetal Muscle Leg muscle
5 chr18:43830000-43854200 Weak transcription Esophagus oesophagus
6 chr18:43830400-43842800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr18:43830600-43847400 Weak transcription Pancreas Pancrea
8 chr18:43830800-43842600 Weak transcription Gastric stomach
9 chr18:43831000-43842800 Weak transcription Small Intestine intestine
10 chr18:43831000-43844600 Weak transcription Spleen Spleen
11 chr18:43831000-43851400 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr18:43831200-43842800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr18:43831200-43843000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr18:43831400-43842000 Weak transcription Fetal Intestine Large intestine
15 chr18:43831400-43842600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr18:43831400-43842600 Weak transcription Duodenum Mucosa Duodenum
17 chr18:43831400-43842800 Weak transcription Brain Substantia Nigra brain
18 chr18:43831400-43842800 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr18:43831400-43848000 Weak transcription Fetal Kidney kidney
20 chr18:43831400-43863200 Weak transcription Fetal Intestine Small intestine
21 chr18:43831600-43842600 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr18:43831600-43842600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr18:43831600-43842800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr18:43831600-43842800 Weak transcription Hela-S3 cervix
25 chr18:43833400-43843000 Weak transcription Adipose Nuclei Adipose
26 chr18:43833600-43842800 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr18:43833800-43856800 Weak transcription Aorta Aorta
28 chr18:43834600-43842800 Weak transcription Fetal Muscle Trunk muscle
29 chr18:43834600-43844000 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr18:43834800-43842600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr18:43834800-43842600 Weak transcription Liver Liver
32 chr18:43834800-43849000 Weak transcription HUVEC blood vessel
33 chr18:43835000-43842800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr18:43835000-43842800 Weak transcription HepG2 liver
35 chr18:43835200-43842000 Weak transcription Primary T cells fromperipheralblood blood
36 chr18:43835200-43842000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr18:43835200-43842800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr18:43835400-43842800 Weak transcription Fetal Lung lung
39 chr18:43836000-43842600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr18:43836200-43842000 Weak transcription Fetal Thymus thymus
41 chr18:43836200-43843800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr18:43836800-43842200 Weak transcription Primary monocytes fromperipheralblood blood
43 chr18:43837200-43842600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr18:43837400-43842200 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr18:43837400-43843000 Weak transcription Brain Hippocampus Middle brain
46 chr18:43838400-43842600 Weak transcription Thymus Thymus
47 chr18:43839400-43842200 Enhancers Placenta Placenta
48 chr18:43839400-43842400 Enhancers NHEK skin
49 chr18:43839400-43842600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
50 chr18:43839400-43842600 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015