The 2.0 version of rSNPBase

Variant report

Variant rs7239202
Chromosome Location chr18:43800737-43800738
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43769200-43802800 Weak transcription Brain Hippocampus Middle brain
2 chr18:43776400-43802000 Weak transcription Brain Germinal Matrix brain
3 chr18:43777000-43812000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr18:43777800-43805000 Weak transcription Fetal Intestine Small intestine
5 chr18:43784600-43802200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr18:43791600-43804200 Weak transcription H9 Cell Line embryonic stem cell
7 chr18:43792200-43814600 Weak transcription Colon Smooth Muscle Colon
8 chr18:43794400-43801600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr18:43794600-43801600 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr18:43794800-43802400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr18:43794800-43802600 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr18:43794800-43815000 Weak transcription Rectal Smooth Muscle rectum
13 chr18:43795800-43800800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr18:43795800-43801200 Strong transcription Dnd41 blood
15 chr18:43795800-43802000 Strong transcription Primary B cells from cord blood blood
16 chr18:43796000-43801000 Strong transcription Primary monocytes fromperipheralblood blood
17 chr18:43796400-43800800 Weak transcription Right Ventricle heart
18 chr18:43796400-43806400 Weak transcription Small Intestine intestine
19 chr18:43796600-43800800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr18:43796600-43800800 Weak transcription Fetal Stomach stomach
21 chr18:43796600-43801600 Weak transcription Fetal Heart heart
22 chr18:43796600-43802200 Weak transcription Brain Cingulate Gyrus brain
23 chr18:43796600-43802400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr18:43796600-43803000 Weak transcription Brain Angular Gyrus brain
25 chr18:43796600-43803000 Weak transcription Right Atrium heart
26 chr18:43796600-43803200 Weak transcription HUVEC blood vessel
27 chr18:43796600-43803600 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr18:43796600-43804000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr18:43796600-43804800 Weak transcription Gastric stomach
30 chr18:43796600-43804800 Weak transcription Left Ventricle heart
31 chr18:43796600-43809600 Weak transcription Aorta Aorta
32 chr18:43796600-43809600 Weak transcription Esophagus oesophagus
33 chr18:43796600-43809600 Weak transcription Lung lung
34 chr18:43796600-43809600 Weak transcription Spleen Spleen
35 chr18:43796600-43814200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr18:43796600-43815200 Weak transcription Pancreas Pancrea
37 chr18:43796600-43820000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
39 chr18:43796800-43802000 Weak transcription Brain Substantia Nigra brain
40 chr18:43796800-43804800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr18:43796800-43804800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr18:43796800-43814800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr18:43797000-43801000 Weak transcription Thymus Thymus
44 chr18:43797000-43801200 Weak transcription A549 lung
45 chr18:43797000-43801800 Weak transcription Brain Anterior Caudate brain
46 chr18:43797000-43802800 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr18:43797000-43804200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr18:43797000-43804800 Weak transcription Fetal Intestine Large intestine
49 chr18:43797000-43804800 Weak transcription Placenta Placenta
50 chr18:43797000-43806200 Weak transcription Liver Liver

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Last update: Aug 31, 2015