The 2.0 version of rSNPBase

Variant report

Variant rs73425190
Chromosome Location chr18:43828994-43828995
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
2 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr18:43798800-43833800 Weak transcription HepG2 liver
4 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr18:43800800-43829000 Weak transcription HSMM muscle
6 chr18:43801200-43829600 Weak transcription Thymus Thymus
7 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
8 chr18:43804800-43829400 Weak transcription Primary hematopoietic stem cells blood
9 chr18:43805400-43829800 Weak transcription Fetal Intestine Large intestine
10 chr18:43806400-43829000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr18:43810000-43829000 Weak transcription Esophagus oesophagus
12 chr18:43810200-43829400 Weak transcription Fetal Intestine Small intestine
13 chr18:43810200-43832400 Weak transcription Aorta Aorta
14 chr18:43815200-43830000 Weak transcription Brain Cingulate Gyrus brain
15 chr18:43815400-43829000 Weak transcription Right Ventricle heart
16 chr18:43815400-43829400 Weak transcription Left Ventricle heart
17 chr18:43815400-43830000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr18:43815400-43830000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr18:43815400-43830200 Weak transcription Gastric stomach
20 chr18:43815600-43829000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr18:43815600-43829600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr18:43815600-43829600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr18:43815800-43829000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr18:43815800-43829000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr18:43815800-43829400 Weak transcription Rectal Smooth Muscle rectum
26 chr18:43815800-43830000 Weak transcription Brain Angular Gyrus brain
27 chr18:43816800-43829400 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr18:43817600-43829800 Weak transcription Pancreas Pancrea
29 chr18:43817600-43830200 Weak transcription Stomach Smooth Muscle stomach
30 chr18:43819600-43829600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr18:43819600-43829600 Weak transcription NHLF lung
32 chr18:43820200-43829600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr18:43820200-43829600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr18:43820400-43829800 Weak transcription H1 Cell Line embryonic stem cell
35 chr18:43820400-43830000 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr18:43820400-43830000 Weak transcription Brain Anterior Caudate brain
37 chr18:43820600-43829400 Weak transcription Primary monocytes fromperipheralblood blood
38 chr18:43820600-43829400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr18:43820600-43829400 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr18:43820600-43829600 Weak transcription Muscle Satellite Cultured Cells --
41 chr18:43820600-43829600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr18:43820600-43829800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr18:43820600-43830000 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr18:43820600-43833400 Weak transcription Ovary ovary
45 chr18:43823600-43830000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr18:43823600-43830600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr18:43824200-43830600 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr18:43824600-43829800 Enhancers Primary T helper naive cells fromperipheralblood blood
49 chr18:43825000-43829000 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr18:43825200-43829800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015