The 2.0 version of rSNPBase

Variant report

Variant rs73425154
Chromosome Location chr18:43789065-43789066
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43755600-43795600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr18:43756800-43796000 Weak transcription Esophagus oesophagus
3 chr18:43761200-43796000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr18:43763000-43795800 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr18:43763400-43799200 Weak transcription Stomach Smooth Muscle stomach
6 chr18:43763600-43796000 Weak transcription Fetal Lung lung
7 chr18:43764600-43795800 Weak transcription Lung lung
8 chr18:43769200-43802800 Weak transcription Brain Hippocampus Middle brain
9 chr18:43770800-43796000 Weak transcription Brain Substantia Nigra brain
10 chr18:43771800-43795800 Weak transcription Brain Anterior Caudate brain
11 chr18:43772000-43795800 Weak transcription Adipose Nuclei Adipose
12 chr18:43772000-43795800 Weak transcription Brain Cingulate Gyrus brain
13 chr18:43772200-43796000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr18:43772800-43795800 Weak transcription Fetal Muscle Trunk muscle
15 chr18:43774400-43795800 Weak transcription Fetal Stomach stomach
16 chr18:43776400-43802000 Weak transcription Brain Germinal Matrix brain
17 chr18:43776800-43795800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr18:43777000-43812000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr18:43777200-43791600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr18:43777200-43795600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr18:43777800-43795800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr18:43777800-43805000 Weak transcription Fetal Intestine Small intestine
23 chr18:43778200-43789200 Enhancers Primary T helper cells fromperipheralblood blood
24 chr18:43780000-43791400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr18:43780000-43791400 Weak transcription Osteobl bone
26 chr18:43780000-43793200 Weak transcription Liver Liver
27 chr18:43780000-43795800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr18:43780200-43793200 Weak transcription Fetal Heart heart
29 chr18:43780400-43791400 Weak transcription K562 blood
30 chr18:43780600-43790600 Weak transcription Left Ventricle heart
31 chr18:43780800-43790600 Weak transcription Psoas Muscle Psoas
32 chr18:43781200-43791400 Weak transcription Hela-S3 cervix
33 chr18:43781400-43795200 Enhancers Primary T helper cells PMA-I stimulated --
34 chr18:43782000-43789400 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr18:43783000-43790600 Weak transcription Right Ventricle heart
36 chr18:43783400-43793200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr18:43783600-43796000 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr18:43784600-43795800 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr18:43784600-43802200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr18:43784800-43790800 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr18:43784800-43791200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr18:43784800-43795800 Weak transcription HSMMtube muscle
43 chr18:43784800-43796000 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr18:43784800-43796000 Weak transcription iPS-20b Cell Line embryonic stem cell
45 chr18:43784800-43796000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr18:43785000-43791200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr18:43785200-43796000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr18:43785400-43791200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr18:43785400-43795800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr18:43785400-43795800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015