The 2.0 version of rSNPBase

Variant report

Variant rs60200148
Chromosome Location chr1:211929847-211929848
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211909400-211939200 Weak transcription Ovary ovary
2 chr1:211909600-211939400 Weak transcription Esophagus oesophagus
3 chr1:211912600-211964600 Weak transcription NHEK skin
4 chr1:211912800-211970200 Weak transcription HMEC breast
5 chr1:211913800-211967800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:211913800-211968800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:211913800-211969600 Weak transcription Small Intestine intestine
8 chr1:211914000-211949600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:211914000-211960400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr1:211914000-211965400 Weak transcription Thymus Thymus
11 chr1:211914000-211973600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:211914200-211947600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:211915800-211991800 Weak transcription Muscle Satellite Cultured Cells --
14 chr1:211916200-211965400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr1:211916800-211994200 Weak transcription Fetal Brain Male brain
16 chr1:211917000-211970400 Strong transcription Monocytes-CD14+_RO01746 blood
17 chr1:211917600-211934800 Weak transcription Colon Smooth Muscle Colon
18 chr1:211918800-211930800 Weak transcription Fetal Lung lung
19 chr1:211919000-211931200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr1:211919200-212001200 Weak transcription Gastric stomach
21 chr1:211920400-211931800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:211922600-211965600 Weak transcription Osteobl bone
23 chr1:211922800-211932200 Weak transcription Placenta Amnion Placenta Amnion
24 chr1:211922800-211939200 Weak transcription HSMMtube muscle
25 chr1:211922800-211956200 Weak transcription HUVEC blood vessel
26 chr1:211922800-211963000 Weak transcription Hela-S3 cervix
27 chr1:211922800-211964800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:211922800-211965400 Weak transcription Right Ventricle heart
29 chr1:211923000-211939200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:211923000-211939200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:211923000-211951800 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr1:211923000-211967200 Weak transcription Colonic Mucosa Colon
33 chr1:211923000-211991800 Weak transcription HSMM muscle
34 chr1:211923200-211939200 Weak transcription Fetal Stomach stomach
35 chr1:211923200-211963400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:211923200-211967200 Weak transcription Primary T regulatory cells fromperipheralblood blood
37 chr1:211923400-211950400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:211923600-211930600 Weak transcription Fetal Kidney kidney
39 chr1:211923800-211939200 Weak transcription Rectal Smooth Muscle rectum
40 chr1:211923800-211939400 Weak transcription Aorta Aorta
41 chr1:211923800-211950000 Weak transcription Placenta Placenta
42 chr1:211923800-211960600 Weak transcription Psoas Muscle Psoas
43 chr1:211924000-211931200 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:211924000-211939200 Weak transcription Pancreas Pancrea
45 chr1:211924000-211950600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:211924000-212002400 Weak transcription NHLF lung
47 chr1:211924200-211930600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr1:211924200-211930600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:211924200-211930600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:211924200-211930800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015