The 2.0 version of rSNPBase

Variant report

Variant rs61598472
Chromosome Location chr1:211998997-211998998
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211919200-212001200 Weak transcription Gastric stomach
2 chr1:211924000-212002400 Weak transcription NHLF lung
3 chr1:211938200-211999400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:211939800-212002400 Weak transcription HSMMtube muscle
5 chr1:211940000-212000600 Weak transcription Rectal Smooth Muscle rectum
6 chr1:211947400-212002400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:211952200-212003000 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:211957600-212000800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:211961200-212002200 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr1:211965800-212002200 Weak transcription Primary T cells from cord blood blood
11 chr1:211966400-212002400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:211971800-212002400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:211974000-212001200 Weak transcription Small Intestine intestine
14 chr1:211979400-212000600 Weak transcription Aorta Aorta
15 chr1:211983000-212002400 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr1:211983200-212002400 Weak transcription Thymus Thymus
17 chr1:211984600-212002400 Weak transcription NH-A brain
18 chr1:211984800-212002000 Weak transcription HUVEC blood vessel
19 chr1:211984800-212002400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr1:211986200-212000600 Weak transcription HepG2 liver
21 chr1:211986200-212000800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr1:211986200-212001000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:211986200-212001000 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr1:211986200-212001000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:211986200-212002400 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr1:211986200-212002800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr1:211986400-212001400 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr1:211986800-212001000 Weak transcription Hela-S3 cervix
29 chr1:211987200-212002400 Weak transcription HMEC breast
30 chr1:211987400-212000600 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:211987600-212000200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:211987800-211999200 Weak transcription NHEK skin
33 chr1:211987800-212001000 Weak transcription Psoas Muscle Psoas
34 chr1:211988000-212000600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:211988000-212000800 Weak transcription Colon Smooth Muscle Colon
36 chr1:211988200-212002400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr1:211988400-212002000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:211988600-212000600 Weak transcription Pancreas Pancrea
39 chr1:211988600-212002400 Weak transcription Stomach Smooth Muscle stomach
40 chr1:211989000-212000200 Weak transcription Fetal Heart heart
41 chr1:211989600-212002800 Weak transcription Lung lung
42 chr1:211990800-211999000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:211991200-212001000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr1:211991200-212002600 Weak transcription Placenta Placenta
45 chr1:211991400-211999600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:211991600-211999600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr1:211992200-212002400 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:211992600-211999400 Weak transcription HSMM muscle
49 chr1:211993000-211999000 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:211993000-212000600 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015