Variant report

Variant	rs10449306
Chromosome Location	chr1:212050720-212050721
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11119835	1.00[JPT][hapmap]
rs11119842	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs28748135	1.00[ASN][1000 genomes]
rs28885134	1.00[ASN][1000 genomes]
rs4951551	1.00[ASN][1000 genomes]
rs56794231	1.00[ASN][1000 genomes]
rs56903779	1.00[ASN][1000 genomes]
rs57370359	0.99[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57554409	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59499736	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60200148	1.00[ASN][1000 genomes]
rs61598472	1.00[ASN][1000 genomes]
rs6662642	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6664087	1.00[ASN][1000 genomes]
rs697001	1.00[JPT][hapmap]
rs73091003	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7524573	1.00[ASN][1000 genomes]
rs7550801	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762218	chr1:212046447-212087682	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:212050000-212050800	Enhancers	Muscle Satellite Cultured Cells	--
2	chr1:212050200-212050800	Enhancers	HSMMtube	muscle
3	chr1:212050600-212050800	Enhancers	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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