Variant report

Variant	rs60213092
Chromosome Location	chr6:29387609-29387610
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16894986	0.91[ASN][1000 genomes]
rs16894996	0.89[ASN][1000 genomes]
rs16895022	0.87[ASN][1000 genomes]
rs16895053	0.83[ASN][1000 genomes]
rs16895058	0.83[ASN][1000 genomes]
rs17183932	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3025650	0.83[ASN][1000 genomes]
rs3025673	0.87[ASN][1000 genomes]
rs362535	0.83[ASN][1000 genomes]
rs61730668	0.91[ASN][1000 genomes]
rs72507814	0.83[ASN][1000 genomes]
rs73747309	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830624	chr6:29274525-29445565	Enhancers Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29386600-29388400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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