Variant report

Variant	rs60461444
Chromosome Location	chr13:79852719-79852720
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1328046	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2149125	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs3861140	0.85[EUR][1000 genomes]
rs3949834	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4296155	0.88[EUR][1000 genomes]
rs4885618	0.85[EUR][1000 genomes]
rs56837033	0.88[EUR][1000 genomes]
rs57210353	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6563091	0.85[EUR][1000 genomes]
rs7322427	0.97[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7322615	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7339418	0.85[EUR][1000 genomes]
rs73557929	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9285308	0.81[EUR][1000 genomes]
rs9530879	0.85[EUR][1000 genomes]
rs9530883	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs9545039	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79847400-79854400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr13:79849600-79853200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr13:79852600-79853400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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