Variant report

Variant	rs9530879
Chromosome Location	chr13:79823377-79823378
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1328046	0.98[EUR][1000 genomes]
rs1536655	0.92[EUR][1000 genomes]
rs2149125	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2149126	0.92[EUR][1000 genomes]
rs3861140	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3949834	0.98[EUR][1000 genomes]
rs4885618	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57210353	0.94[EUR][1000 genomes]
rs60461444	0.85[EUR][1000 genomes]
rs6563091	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7322427	0.93[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7322615	0.98[EUR][1000 genomes]
rs7339418	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73557929	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9285308	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9530883	0.98[EUR][1000 genomes]
rs9545039	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523536	chr13:79820126-79824974	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:79817600-79824400	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr13:79820800-79824600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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