Variant report

Variant	rs60824015
Chromosome Location	chr9:116573776-116573777
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:116571052..116573943-chr9:116574740..116577706,2	K562	blood:

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10817522	0.87[ASN][1000 genomes]
rs10817525	0.89[ASN][1000 genomes]
rs10817526	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10817527	0.89[ASN][1000 genomes]
rs10981929	0.84[ASN][1000 genomes]
rs10981933	0.85[ASN][1000 genomes]
rs10981934	0.86[ASN][1000 genomes]
rs10981936	0.86[ASN][1000 genomes]
rs10981937	0.87[ASN][1000 genomes]
rs10981938	0.86[ASN][1000 genomes]
rs10981939	0.90[ASN][1000 genomes]
rs10981942	0.89[ASN][1000 genomes]
rs10981943	0.89[ASN][1000 genomes]
rs10981944	0.89[ASN][1000 genomes]
rs10981946	0.89[ASN][1000 genomes]
rs10981947	0.89[ASN][1000 genomes]
rs10981953	0.89[ASN][1000 genomes]
rs10981954	0.89[ASN][1000 genomes]
rs10981961	0.85[ASN][1000 genomes]
rs10981969	0.85[ASN][1000 genomes]
rs10981970	0.85[ASN][1000 genomes]
rs10981971	0.85[ASN][1000 genomes]
rs10981972	0.85[ASN][1000 genomes]
rs10981973	0.85[ASN][1000 genomes]
rs10981974	0.83[ASN][1000 genomes]
rs10981975	0.85[ASN][1000 genomes]
rs10981976	0.85[ASN][1000 genomes]
rs11536809	0.85[ASN][1000 genomes]
rs11560574	0.89[ASN][1000 genomes]
rs12237042	0.85[ASN][1000 genomes]
rs12237457	0.85[ASN][1000 genomes]
rs12683246	0.85[ASN][1000 genomes]
rs12683412	0.90[ASN][1000 genomes]
rs12683629	0.90[ASN][1000 genomes]
rs12683641	0.90[ASN][1000 genomes]
rs13302495	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2418255	0.89[ASN][1000 genomes]
rs2900567	0.89[ASN][1000 genomes]
rs55742527	0.85[ASN][1000 genomes]
rs57490136	0.85[ASN][1000 genomes]
rs57961249	0.86[ASN][1000 genomes]
rs58226726	0.89[ASN][1000 genomes]
rs58744729	0.82[ASN][1000 genomes]
rs61389135	0.85[ASN][1000 genomes]
rs7038455	0.89[ASN][1000 genomes]
rs73548564	0.90[ASN][1000 genomes]
rs988015	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116570400-116576800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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