The 2.0 version of rSNPBase

Variant report

Variant rs60891705
Chromosome Location chr3:53356034-53356035
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53326600-53364400 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr3:53327200-53358200 Weak transcription K562 blood
3 chr3:53334600-53358400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr3:53338000-53374000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:53338200-53380200 Weak transcription Fetal Brain Male brain
6 chr3:53338400-53367400 Weak transcription Small Intestine intestine
7 chr3:53344000-53364200 Weak transcription Right Ventricle heart
8 chr3:53344600-53358200 Weak transcription Pancreas Pancrea
9 chr3:53345800-53357800 Strong transcription Fetal Intestine Small intestine
10 chr3:53345800-53362600 Weak transcription NHLF lung
11 chr3:53346000-53373600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr3:53346200-53365200 Weak transcription Fetal Kidney kidney
13 chr3:53346200-53378600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr3:53346400-53358200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr3:53346400-53358200 Weak transcription Brain Cingulate Gyrus brain
16 chr3:53346400-53358200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr3:53346400-53360400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:53346400-53360400 Weak transcription H9 Cell Line embryonic stem cell
19 chr3:53346400-53360400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr3:53346400-53360400 Weak transcription Aorta Aorta
21 chr3:53346400-53360400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr3:53346400-53362200 Weak transcription Stomach Mucosa stomach
23 chr3:53346400-53362800 Weak transcription Rectal Smooth Muscle rectum
24 chr3:53346400-53365400 Weak transcription Brain Angular Gyrus brain
25 chr3:53346400-53367600 Weak transcription Placenta Amnion Placenta Amnion
26 chr3:53346400-53370000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr3:53346600-53380600 Weak transcription Spleen Spleen
28 chr3:53347000-53357200 Weak transcription Primary hematopoietic stem cells blood
29 chr3:53347000-53359200 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr3:53347200-53360400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr3:53347200-53371400 Weak transcription HMEC breast
32 chr3:53347400-53360600 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr3:53350000-53356200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:53350800-53357400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr3:53352000-53362200 Weak transcription Right Atrium heart
36 chr3:53352200-53365400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr3:53352400-53358200 Weak transcription Gastric stomach
38 chr3:53352800-53380600 Weak transcription Esophagus oesophagus
39 chr3:53353000-53356600 Weak transcription Fetal Muscle Trunk muscle
40 chr3:53353000-53357000 Weak transcription Ovary ovary
41 chr3:53353000-53358200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr3:53353000-53358200 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr3:53353000-53360400 Weak transcription H1 Cell Line embryonic stem cell
44 chr3:53353000-53360400 Weak transcription Thymus Thymus
45 chr3:53353000-53374600 Weak transcription Fetal Brain Female brain
46 chr3:53353000-53380600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr3:53353200-53357600 Weak transcription Lung lung
48 chr3:53353200-53358200 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr3:53353200-53358400 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr3:53353200-53359800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015