The 2.0 version of rSNPBase

Variant report

Variant rs73843113
Chromosome Location chr3:53332460-53332461
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53309400-53351200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr3:53312200-53337400 Weak transcription Psoas Muscle Psoas
3 chr3:53315200-53333800 Strong transcription Primary monocytes fromperipheralblood blood
4 chr3:53315200-53338400 Strong transcription Fetal Muscle Trunk muscle
5 chr3:53316400-53333600 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr3:53316400-53337600 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr3:53316600-53333600 Strong transcription Primary T cells fromperipheralblood blood
8 chr3:53316600-53333800 Strong transcription Placenta Placenta
9 chr3:53316600-53338600 Strong transcription Fetal Muscle Leg muscle
10 chr3:53317200-53332600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr3:53318000-53345000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr3:53318000-53345800 Weak transcription Stomach Mucosa stomach
13 chr3:53321800-53337400 Weak transcription Fetal Kidney kidney
14 chr3:53321800-53347600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr3:53322400-53333800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr3:53322400-53343600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr3:53322400-53344800 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr3:53322400-53353600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr3:53322600-53337400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr3:53323600-53339400 Strong transcription Fetal Intestine Large intestine
21 chr3:53324000-53333400 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr3:53324000-53340400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr3:53325400-53333800 Strong transcription Dnd41 blood
24 chr3:53326600-53333000 Weak transcription Rectal Smooth Muscle rectum
25 chr3:53326600-53333400 Weak transcription Fetal Heart heart
26 chr3:53326600-53335600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr3:53326600-53336600 Weak transcription Aorta Aorta
28 chr3:53326600-53337200 Weak transcription Brain Cingulate Gyrus brain
29 chr3:53326600-53337600 Weak transcription Brain Angular Gyrus brain
30 chr3:53326600-53342400 Weak transcription H9 Cell Line embryonic stem cell
31 chr3:53326600-53364400 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr3:53326800-53332600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:53326800-53332600 Weak transcription NHLF lung
34 chr3:53326800-53332800 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr3:53326800-53333400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr3:53326800-53334800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr3:53326800-53335600 Weak transcription Brain Germinal Matrix brain
38 chr3:53326800-53336200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr3:53326800-53337200 Weak transcription Esophagus oesophagus
40 chr3:53326800-53337400 Weak transcription Colonic Mucosa Colon
41 chr3:53326800-53337600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr3:53327000-53332600 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr3:53327000-53333000 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr3:53327000-53334800 Weak transcription H1 Cell Line embryonic stem cell
45 chr3:53327000-53335800 Weak transcription Placenta Amnion Placenta Amnion
46 chr3:53327000-53337600 Weak transcription Brain Anterior Caudate brain
47 chr3:53327200-53333000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr3:53327200-53358200 Weak transcription K562 blood
49 chr3:53327400-53332600 Weak transcription HMEC breast
50 chr3:53328000-53347200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015