Variant report

Variant	rs60913366
Chromosome Location	chr14:84765025-84765026
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs17119875	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs41324950	0.82[AFR][1000 genomes]
rs56935059	0.84[AFR][1000 genomes]
rs57013094	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58718562	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59400041	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60939651	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61615743	0.84[AFR][1000 genomes]
rs72705243	0.94[AFR][1000 genomes]
rs73384941	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73384944	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73384953	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73384955	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386429	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386433	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386435	1.00[AFR][1000 genomes]
rs73386438	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386441	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386448	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386449	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386450	1.00[AMR][1000 genomes]
rs73386453	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386455	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386458	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386459	0.84[AFR][1000 genomes]
rs73386461	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386462	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386469	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386471	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386472	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386477	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386488	0.98[AFR][1000 genomes]
rs73386491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386492	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386493	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386495	1.00[AFR][1000 genomes]
rs73386499	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73386502	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73388307	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73388313	1.00[AFR][1000 genomes]
rs73388315	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73388317	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73388318	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73388321	1.00[AFR][1000 genomes]
rs73388324	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902161	chr14:84699866-84769903	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv832845	chr14:84726378-84900199	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84764600-84765400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr14:84764600-84766000	Enhancers	Placenta Amnion	Placenta Amnion
3	chr14:84764800-84765200	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr14:84765000-84765400	Flanking Active TSS	Adipose Nuclei	Adipose
5	chr14:84765000-84766200	Enhancers	Fetal Lung	lung

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