Variant report
| Variant | rs73386450 |
|---|---|
| Chromosome Location | chr14:84755530-84755531 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr14:84751809..84754653-chr14:84755331..84758306,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:41)
| rs_ID | r2[population] |
|---|---|
| rs17119875 | 1.00[AMR][1000 genomes] |
| rs57013094 | 1.00[AMR][1000 genomes] |
| rs58718562 | 1.00[AMR][1000 genomes] |
| rs59400041 | 1.00[AMR][1000 genomes] |
| rs60913366 | 1.00[AMR][1000 genomes] |
| rs60939651 | 1.00[AMR][1000 genomes] |
| rs73384941 | 1.00[AMR][1000 genomes] |
| rs73384944 | 1.00[AMR][1000 genomes] |
| rs73384953 | 1.00[AMR][1000 genomes] |
| rs73384955 | 1.00[AMR][1000 genomes] |
| rs73386428 | 1.00[AMR][1000 genomes] |
| rs73386429 | 1.00[AMR][1000 genomes] |
| rs73386433 | 1.00[AMR][1000 genomes] |
| rs73386438 | 1.00[AMR][1000 genomes] |
| rs73386441 | 1.00[AMR][1000 genomes] |
| rs73386448 | 1.00[AMR][1000 genomes] |
| rs73386449 | 1.00[AMR][1000 genomes] |
| rs73386453 | 1.00[AMR][1000 genomes] |
| rs73386455 | 1.00[AMR][1000 genomes] |
| rs73386458 | 1.00[AMR][1000 genomes] |
| rs73386461 | 1.00[AMR][1000 genomes] |
| rs73386462 | 1.00[AMR][1000 genomes] |
| rs73386469 | 1.00[AMR][1000 genomes] |
| rs73386471 | 1.00[AMR][1000 genomes] |
| rs73386472 | 1.00[AMR][1000 genomes] |
| rs73386474 | 1.00[AMR][1000 genomes] |
| rs73386477 | 1.00[AMR][1000 genomes] |
| rs73386480 | 1.00[AMR][1000 genomes] |
| rs73386481 | 1.00[AMR][1000 genomes] |
| rs73386491 | 1.00[AMR][1000 genomes] |
| rs73386492 | 1.00[AMR][1000 genomes] |
| rs73386493 | 1.00[AMR][1000 genomes] |
| rs73386499 | 1.00[AMR][1000 genomes] |
| rs73386502 | 1.00[AMR][1000 genomes] |
| rs73388307 | 1.00[AMR][1000 genomes] |
| rs73388315 | 1.00[AMR][1000 genomes] |
| rs73388317 | 1.00[AMR][1000 genomes] |
| rs73388318 | 1.00[AMR][1000 genomes] |
| rs73388324 | 1.00[AMR][1000 genomes] |
| rs73388339 | 0.94[AFR][1000 genomes] |
| rs73388341 | 0.82[AFR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv902161 | chr14:84699866-84769903 | Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| 2 | nsv832845 | chr14:84726378-84900199 | Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | Chromatin interactive regionlncRNA | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:84752400-84758800 | Weak transcription | Adipose Nuclei | Adipose |
