The 2.0 version of rSNPBase

Variant report

Variant rs61016409
Chromosome Location chr7:50458434-50458435
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50420000-50461800 Genic enhancers Primary T cells fromperipheralblood blood
2 chr7:50430600-50459800 Strong transcription Primary monocytes fromperipheralblood blood
3 chr7:50431200-50460600 Strong transcription Dnd41 blood
4 chr7:50431400-50472600 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr7:50437200-50460200 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr7:50439400-50460600 Genic enhancers Primary T helper cells PMA-I stimulated --
7 chr7:50440800-50461400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr7:50441200-50459800 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr7:50441200-50460200 Strong transcription Thymus Thymus
10 chr7:50441200-50460400 Strong transcription Primary hematopoietic stem cells blood
11 chr7:50441200-50460400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr7:50441800-50459200 Strong transcription Fetal Thymus thymus
13 chr7:50442200-50460200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr7:50445400-50461400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr7:50446600-50461400 Weak transcription Colonic Mucosa Colon
16 chr7:50447200-50467400 Weak transcription Esophagus oesophagus
17 chr7:50447200-50467400 Weak transcription Gastric stomach
18 chr7:50449200-50467400 Weak transcription Liver Liver
19 chr7:50449800-50459200 Strong transcription Primary B cells from cord blood blood
20 chr7:50450400-50460000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr7:50451400-50462600 Weak transcription Rectal Smooth Muscle rectum
22 chr7:50453200-50459000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr7:50453200-50467800 Weak transcription Pancreas Pancrea
24 chr7:50453600-50460000 Weak transcription GM12878-XiMat blood
25 chr7:50454400-50461000 Genic enhancers Primary T helper naive cells fromperipheralblood blood
26 chr7:50454600-50460000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr7:50454600-50460800 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr7:50454600-50461000 Genic enhancers Primary T helper cells fromperipheralblood blood
29 chr7:50454600-50462400 Genic enhancers Primary T helper naive cells from peripheral blood blood
30 chr7:50454800-50460000 Genic enhancers Primary T cells from cord blood blood
31 chr7:50455000-50460000 Strong transcription K562 blood
32 chr7:50455200-50460000 Weak transcription Lung lung
33 chr7:50455400-50459800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr7:50455400-50460200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr7:50455400-50463400 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr7:50455600-50461200 Genic enhancers Primary T killer memory cells from peripheral blood blood
37 chr7:50456200-50461200 Genic enhancers Primary T regulatory cells fromperipheralblood blood
38 chr7:50456600-50462200 Genic enhancers Primary T killer naive cells fromperipheralblood blood
39 chr7:50456800-50461200 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
40 chr7:50457400-50461400 Weak transcription Duodenum Mucosa Duodenum
41 chr7:50457400-50461400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr7:50457600-50459000 Weak transcription Spleen Spleen
43 chr7:50458000-50459200 Strong transcription Primary B cells from peripheral blood blood
44 chr7:50458400-50459400 Strong transcription Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015