The 2.0 version of rSNPBase

Variant report

Variant rs61082352
Chromosome Location chr11:15840333-15840334
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:15829800-15848000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:15836600-15841800 Enhancers Adipose Nuclei Adipose
3 chr11:15837600-15840800 Weak transcription Brain Angular Gyrus brain
4 chr11:15837600-15841800 Enhancers Rectal Mucosa Donor 31 rectum
5 chr11:15838000-15841400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr11:15838200-15841400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr11:15838400-15841200 Weak transcription NHEK skin
8 chr11:15838600-15840600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr11:15838800-15841400 Weak transcription Right Atrium heart
10 chr11:15838800-15847000 Weak transcription Pancreas Pancrea
11 chr11:15838800-15848000 Weak transcription Left Ventricle heart
12 chr11:15839000-15840800 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr11:15839000-15841000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr11:15839000-15841400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr11:15839000-15841400 Weak transcription Stomach Smooth Muscle stomach
16 chr11:15839000-15841400 Weak transcription HMEC breast
17 chr11:15839000-15841600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr11:15839000-15843000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr11:15839000-15845000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:15839400-15841400 Weak transcription Muscle Satellite Cultured Cells --
21 chr11:15839400-15841800 Enhancers Colon Smooth Muscle Colon
22 chr11:15839400-15845000 Weak transcription NH-A brain
23 chr11:15839400-15850200 Weak transcription Aorta Aorta
24 chr11:15839600-15841200 Enhancers Fetal Intestine Small intestine
25 chr11:15839600-15841400 Enhancers Pancreatic Islets Pancreatic Islet
26 chr11:15839600-15841600 Enhancers Fetal Intestine Large intestine
27 chr11:15839800-15840600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr11:15839800-15840800 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr11:15839800-15841200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:15839800-15841200 Enhancers Small Intestine intestine
31 chr11:15839800-15841800 Enhancers Stomach Mucosa stomach
32 chr11:15839800-15842000 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr11:15839800-15845600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr11:15839800-15845600 Weak transcription Osteobl bone
35 chr11:15839800-15847400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:15840000-15840400 Weak transcription Brain Anterior Caudate brain
37 chr11:15840000-15840600 Weak transcription Duodenum Mucosa Duodenum
38 chr11:15840000-15840800 Enhancers Fetal Kidney kidney
39 chr11:15840000-15841200 Weak transcription Fetal Muscle Leg muscle
40 chr11:15840000-15841800 Enhancers Liver Liver
41 chr11:15840200-15840400 Enhancers Brain Cingulate Gyrus brain
42 chr11:15840200-15840600 Weak transcription Brain Hippocampus Middle brain
43 chr11:15840200-15841400 Enhancers Primary monocytes fromperipheralblood blood
44 chr11:15840200-15841600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr11:15840200-15841600 Enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015