The 2.0 version of rSNPBase

Variant report

Variant rs6111114
Chromosome Location chr20:16410935-16410936
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16384000-16432600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr20:16387400-16411800 Weak transcription Colonic Mucosa Colon
3 chr20:16391800-16414600 Weak transcription Colon Smooth Muscle Colon
4 chr20:16392200-16412800 Weak transcription Fetal Kidney kidney
5 chr20:16392200-16453000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr20:16392400-16411600 Weak transcription Brain Substantia Nigra brain
7 chr20:16395200-16411400 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr20:16396000-16411400 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr20:16396200-16412800 Weak transcription NHDF-Ad bronchial
10 chr20:16396400-16411000 Weak transcription Muscle Satellite Cultured Cells --
11 chr20:16397400-16412000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr20:16398200-16417000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr20:16398200-16431000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr20:16400000-16440000 Weak transcription NHEK skin
15 chr20:16400200-16414000 Weak transcription Fetal Brain Female brain
16 chr20:16401000-16414200 Weak transcription Fetal Brain Male brain
17 chr20:16401200-16417000 Weak transcription Brain Germinal Matrix brain
18 chr20:16402600-16412200 Weak transcription Brain Cingulate Gyrus brain
19 chr20:16402800-16412800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr20:16402800-16412800 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr20:16402800-16413600 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr20:16403000-16413000 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr20:16404000-16411000 Strong transcription Adipose Nuclei Adipose
24 chr20:16404200-16411200 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr20:16404200-16411400 Strong transcription Primary T cells from cord blood blood
26 chr20:16404200-16419200 Weak transcription Fetal Heart heart
27 chr20:16404600-16411200 Strong transcription Duodenum Smooth Muscle Duodenum
28 chr20:16404600-16414000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr20:16404800-16412800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr20:16404800-16414200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr20:16404800-16419800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr20:16404800-16425000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr20:16405000-16411400 Weak transcription Right Ventricle heart
34 chr20:16405000-16419200 Weak transcription A549 lung
35 chr20:16405400-16411200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr20:16405400-16414000 Weak transcription Spleen Spleen
37 chr20:16405400-16434600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr20:16405600-16411000 Weak transcription Lung lung
39 chr20:16405600-16411200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr20:16405600-16411600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr20:16405600-16431000 Weak transcription Pancreas Pancrea
42 chr20:16406800-16414200 Weak transcription Fetal Stomach stomach
43 chr20:16407200-16411600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr20:16407200-16412800 Weak transcription Brain Inferior Temporal Lobe brain
45 chr20:16407200-16414800 Weak transcription Fetal Muscle Trunk muscle
46 chr20:16408000-16420200 Weak transcription Primary B cells from cord blood blood
47 chr20:16408400-16419200 Weak transcription Psoas Muscle Psoas
48 chr20:16408400-16424400 Weak transcription Primary T cells fromperipheralblood blood
49 chr20:16408600-16411400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr20:16408600-16411400 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015