The 2.0 version of rSNPBase

Variant report

Variant rs61349439
Chromosome Location chr8:67696587-67696588
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:67687800-67702600 Weak transcription Spleen Spleen
2 chr8:67688000-67713800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr8:67688000-67783000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr8:67688200-67697200 Weak transcription Gastric stomach
5 chr8:67688200-67703800 Weak transcription Lung lung
6 chr8:67688200-67738000 Weak transcription HSMM muscle
7 chr8:67688400-67703000 Weak transcription Aorta Aorta
8 chr8:67688400-67706600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr8:67688400-67730400 Weak transcription HSMMtube muscle
10 chr8:67688600-67698000 Weak transcription Psoas Muscle Psoas
11 chr8:67688600-67699400 Weak transcription Primary T cells fromperipheralblood blood
12 chr8:67688600-67707000 Weak transcription Thymus Thymus
13 chr8:67688800-67697200 Weak transcription Primary T cells from cord blood blood
14 chr8:67688800-67702800 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr8:67688800-67706600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr8:67688800-67707000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr8:67688800-67707200 Weak transcription Colonic Mucosa Colon
18 chr8:67688800-67709800 Weak transcription H9 Cell Line embryonic stem cell
19 chr8:67689000-67782600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr8:67689200-67707200 Weak transcription Colon Smooth Muscle Colon
21 chr8:67689600-67702800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr8:67689800-67709600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr8:67690000-67697200 Weak transcription Fetal Intestine Small intestine
24 chr8:67690000-67702400 Weak transcription Fetal Intestine Large intestine
25 chr8:67690200-67700400 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr8:67690200-67706000 Weak transcription Duodenum Mucosa Duodenum
27 chr8:67691000-67699200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr8:67691400-67697000 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr8:67691600-67730600 Weak transcription Fetal Stomach stomach
30 chr8:67692400-67697400 Enhancers Primary monocytes fromperipheralblood blood
31 chr8:67692400-67697400 Enhancers Brain Cingulate Gyrus brain
32 chr8:67692600-67697200 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr8:67693800-67698600 Enhancers Primary B cells from cord blood blood
34 chr8:67693800-67706800 Weak transcription Fetal Thymus thymus
35 chr8:67694000-67697400 Enhancers Brain Substantia Nigra brain
36 chr8:67694200-67705600 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr8:67695200-67697400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr8:67695400-67697600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr8:67695400-67721600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr8:67695600-67696600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
41 chr8:67695600-67698800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr8:67695800-67706800 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr8:67696000-67696600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr8:67696000-67696600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr8:67696000-67696600 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr8:67696000-67696600 Enhancers Adipose Nuclei Adipose
47 chr8:67696000-67696800 Enhancers Muscle Satellite Cultured Cells --
48 chr8:67696000-67697200 Enhancers Brain Hippocampus Middle brain
49 chr8:67696000-67697400 Enhancers Brain Anterior Caudate brain
50 chr8:67696000-67698000 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015