Variant report

Variant	rs73691155
Chromosome Location	chr8:67837355-67837356
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:288)
CpG islands
(count:0)
Chromatin interactive
region (count:21)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:288 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr8:67836878-67838078	K562	blood:	n/a	n/a
2	REST	chr8:67836870-67838154	A549	lung:	n/a	chr8:67837951-67837958
3	MAX	chr8:67836852-67838069	Hela-S3	cervix:	n/a	n/a
4	RFX5	chr8:67836873-67837990	Hela-S3	cervix:	n/a	n/a
5	ETS1	chr8:67837348-67837980	K562	blood:	n/a	chr8:67837889-67837900
6	POLR2A	chr8:67837284-67838037	GM10847	blood:	n/a	n/a
7	TAF1	chr8:67837193-67838011	SK-N-SH	brain:	n/a	n/a
8	YY1	chr8:67837208-67837934	GM12878	blood:	n/a	chr8:67837894-67837903
9	EP300	chr8:67837295-67837846	HepG2	liver:	n/a	n/a
10	POLR2A	chr8:67837188-67838216	A549	lung:	n/a	n/a
11	TAF1	chr8:67836882-67838112	PFSK-1	brain:	n/a	n/a
12	POLR2A	chr8:67836917-67837924	HepG2	liver:	n/a	n/a
13	POLR2A	chr8:67836843-67838007	GM12891	blood:	n/a	n/a
14	MAX	chr8:67836769-67838459	K562	blood:	n/a	n/a
15	POLR2A	chr8:67836490-67838139	H1-hESC	embryonic stem cell:	n/a	n/a
16	TAF7	chr8:67837190-67838030	H1-hESC	embryonic stem cell:	n/a	n/a
17	HEY1	chr8:67836499-67838947	K562	blood:	n/a	n/a
18	CHD2	chr8:67837248-67838019	GM12878	blood:	n/a	n/a
19	RELA	chr8:67836913-67838009	GM18505	blood:	n/a	n/a
20	HA-E2F1	chr8:67836869-67838039	MCF-7	breast:	n/a	n/a
21	MAX	chr8:67836782-67838095	MCF-7	breast:	n/a	n/a
22	TAF1	chr8:67837294-67838181	ECC-1	luminal epithelium:	n/a	n/a
23	YY1	chr8:67837350-67837931	K562	blood:	n/a	chr8:67837894-67837903
24	POLR2A	chr8:67837221-67838142	ECC-1	luminal epithelium:	n/a	n/a
25	MAX	chr8:67836816-67838295	HepG2	liver:	n/a	n/a
26	POLR2A	chr8:67836788-67839106	K562	blood:	n/a	n/a
27	E2F6	chr8:67836872-67838113	H1-hESC	embryonic stem cell:	n/a	chr8:67837765-67837776
28	TCF12	chr8:67837248-67838188	ECC-1	luminal epithelium:	n/a	chr8:67837913-67837920
29	REST	chr8:67837216-67837988	PFSK-1	brain:	n/a	chr8:67837951-67837958
30	POLR2A	chr8:67836784-67838045	HUVEC	blood vessel:	n/a	n/a
31	POLR2A	chr8:67836839-67838013	GM12891	blood:	n/a	n/a
32	MAX	chr8:67836885-67837952	HepG2	liver:	n/a	n/a
33	TEAD4	chr8:67837165-67837935	K562	blood:	n/a	n/a
34	HEY1	chr8:67836863-67839052	K562	blood:	n/a	n/a
35	POLR2A	chr8:67832113-67839049	K562	blood:	n/a	n/a
36	POLR2A	chr8:67836833-67838088	K562	blood:	n/a	n/a
37	MYC	chr8:67836869-67838479	NB4	blood:	n/a	n/a
38	POU2F2	chr8:67837307-67838023	GM12891	blood:	n/a	n/a
39	POLR2A	chr8:67836448-67838193	GM12892	blood:	n/a	n/a
40	MAX	chr8:67836715-67838167	MCF-7	breast:	n/a	n/a
41	POLR2A	chr8:67836908-67837997	GM12878	blood:	n/a	n/a
42	POLR2A	chr8:67835960-67839106	HCT-116	colon:	n/a	n/a
43	GABPA	chr8:67836798-67838404	MCF-7	breast:	n/a	n/a
44	SIN3AK20	chr8:67837181-67837979	K562	blood:	n/a	n/a
45	KAP1	chr8:67836916-67838072	HEK293	kidney:	n/a	n/a
46	POLR2A	chr8:67836822-67838048	HUVEC	blood vessel:	n/a	n/a
47	TAF1	chr8:67837340-67838115	MCF-7	breast:	n/a	n/a
48	RELA	chr8:67836973-67838030	GM15510	blood:	n/a	n/a
49	POLR2A	chr8:67832244-67839139	K562	blood:	n/a	n/a
50	POLR2A	chr8:67831072-67838273	SK-N-MC	brain:	n/a	n/a

No data

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:67827975..67841001-chr8:67966279..67982243,48	K562	blood:
2	chr8:67578845..67580958-chr8:67835447..67837696,2	K562	blood:
3	chr8:67523975..67526544-chr8:67835698..67837755,2	MCF-7	breast:
4	chr17:57916854..57919441-chr8:67836060..67837816,2	MCF-7	breast:
5	chr8:67835724..67839016-chr8:67920843..67924077,3	K562	blood:
6	chr8:67836242..67840653-chr8:67938830..67942453,3	K562	blood:
7	chr8:67836559..67839437-chr8:67866045..67867764,2	MCF-7	breast:
8	chr8:67836931..67838124-chr8:67973699..67974497,3	MCF-7	breast:
9	chr8:67835610..67837690-chr8:68125017..68126904,2	K562	blood:
10	chr8:67833327..67839681-chr8:67939129..67942608,10	MCF-7	breast:
11	chr8:67686161..67689126-chr8:67837035..67839189,3	MCF-7	breast:
12	chr8:67607752..67610042-chr8:67835709..67837754,2	MCF-7	breast:
13	chr8:67835785..67837537-chr8:67954623..67956454,2	MCF-7	breast:
14	chr8:67835104..67837879-chr8:67939272..67941824,2	K562	blood:
15	chr8:67835712..67837745-chr8:67939707..67941634,2	MCF-7	breast:
16	chr8:67837330..67837914-chr9:131709577..131710355,2	HCT-116	colon:
17	chr8:67835927..67837540-chr8:67865871..67868134,2	K562	blood:
18	chr3:186284633..186285274-chr8:67837298..67837859,2	NB4	blood:
19	chr8:67830433..67839604-chr8:67970368..67979371,24	MCF-7	breast:
20	chr8:67830645..67839054-chr8:67969883..67975997,15	MCF-7	breast:
21	chr8:67828671..67841001-chr8:67968948..67981786,43	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C8orf45-1	chr8:67836941-67837831	XLOC_006829

No data

Variant related genes	Relation type
SNORD87	TF binding region
SNHG6	TF binding region
ENSG00000095319	Chromatin interaction
ENSG00000175283	Chromatin interaction
ENSG00000104205	Chromatin interaction
ENSG00000113838	Chromatin interaction
ENSG00000121022	Chromatin interaction
ENSG00000090520	Chromatin interaction
ENSG00000261787	Chromatin interaction
ENSG00000175073	Chromatin interaction
ENSG00000266491	Chromatin interaction
ENSG00000213865	Chromatin interaction
ENSG00000270024	Chromatin interaction
ENSG00000185697	Chromatin interaction
ENSG00000178125	Chromatin interaction
ENSG00000104218	Chromatin interaction
ENSG00000199004	Chromatin interaction

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs11985129	1.00[AMR][1000 genomes]
rs11986740	1.00[AMR][1000 genomes]
rs11987703	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11988493	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991444	1.00[AMR][1000 genomes]
rs11994200	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11995086	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11995838	1.00[AMR][1000 genomes]
rs11997510	1.00[AMR][1000 genomes]
rs13280915	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35063782	1.00[AMR][1000 genomes]
rs35871529	1.00[AMR][1000 genomes]
rs55773727	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55908156	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56036237	1.00[AMR][1000 genomes]
rs56856536	1.00[AMR][1000 genomes]
rs56946170	1.00[AMR][1000 genomes]
rs58005291	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58411534	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59037712	1.00[AMR][1000 genomes]
rs59483566	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59550227	0.92[AFR][1000 genomes]
rs60303565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60434307	1.00[AMR][1000 genomes]
rs60435775	1.00[AMR][1000 genomes]
rs60452538	1.00[AMR][1000 genomes]
rs61349439	1.00[AMR][1000 genomes]
rs6991442	1.00[AMR][1000 genomes]
rs6992429	1.00[AMR][1000 genomes]
rs6997204	1.00[AMR][1000 genomes]
rs6997393	1.00[AMR][1000 genomes]
rs7001834	1.00[AMR][1000 genomes]
rs7001886	1.00[AMR][1000 genomes]
rs7003330	1.00[AMR][1000 genomes]
rs7011698	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691150	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691154	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691160	1.00[AMR][1000 genomes]
rs73691181	1.00[AMR][1000 genomes]
rs73691184	1.00[AMR][1000 genomes]
rs73691590	1.00[AMR][1000 genomes]
rs73691596	1.00[AMR][1000 genomes]
rs73691602	1.00[AMR][1000 genomes]
rs73693108	1.00[AMR][1000 genomes]
rs73693123	1.00[AMR][1000 genomes]
rs73693607	1.00[AMR][1000 genomes]
rs73693608	1.00[AMR][1000 genomes]
rs73693609	1.00[AMR][1000 genomes]
rs73693616	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693617	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693618	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693622	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693624	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693628	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693633	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7815796	1.00[AMR][1000 genomes]
rs7815839	1.00[AMR][1000 genomes]
rs7820540	1.00[AMR][1000 genomes]
rs7820637	1.00[AMR][1000 genomes]
rs9694590	1.00[AMR][1000 genomes]

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67834400-67838000	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
2	chr8:67834400-67838200	Active TSS	Right Ventricle	heart
3	chr8:67834600-67837400	Transcr. at gene 5' and 3'	Dnd41	blood
4	chr8:67835000-67837400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:67835000-67838200	Active TSS	NHLF	lung
6	chr8:67835200-67837400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr8:67835200-67837400	Flanking Active TSS	HUVEC	blood vessel
8	chr8:67835200-67838200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr8:67835400-67837400	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
10	chr8:67835400-67837400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr8:67835400-67837400	Flanking Active TSS	Adipose Nuclei	Adipose
12	chr8:67835400-67838200	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr8:67835600-67837400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr8:67835600-67837800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr8:67835600-67838000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
16	chr8:67835600-67838000	Active TSS	GM12878-XiMat	blood
17	chr8:67835600-67838200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr8:67835600-67838400	Active TSS	H9 Cell Line	embryonic stem cell
19	chr8:67835800-67838000	Active TSS	Brain Germinal Matrix	brain
20	chr8:67835800-67838200	Active TSS	Esophagus	oesophagus
21	chr8:67835800-67839200	Active TSS	iPS-15b Cell Line	embryonic stem cell
22	chr8:67835800-67839400	Active TSS	Hela-S3	cervix
23	chr8:67836000-67837400	Flanking Active TSS	Primary B cells from cord blood	blood
24	chr8:67836000-67837400	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
25	chr8:67836000-67837400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
26	chr8:67836000-67838200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr8:67836000-67838200	Active TSS	NH-A	brain
28	chr8:67836000-67838200	Active TSS	NHDF-Ad	bronchial
29	chr8:67836000-67838400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr8:67836000-67838400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr8:67836000-67838600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
32	chr8:67836200-67837600	Flanking Active TSS	Primary hematopoietic stem cells	blood
33	chr8:67836200-67838000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
34	chr8:67836200-67838000	Active TSS	Fetal Thymus	thymus
35	chr8:67836200-67838000	Active TSS	Rectal Mucosa Donor 29	rectum
36	chr8:67836200-67838200	Active TSS	Muscle Satellite Cultured Cells	--
37	chr8:67836200-67838200	Active TSS	Left Ventricle	heart
38	chr8:67836200-67838200	Active TSS	HSMMtube	muscle
39	chr8:67836200-67838400	Active TSS	Brain Angular Gyrus	brain
40	chr8:67836200-67838400	Active TSS	Psoas Muscle	Psoas
41	chr8:67836200-67838400	Active TSS	HSMM	muscle
42	chr8:67836200-67838600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
43	chr8:67836200-67838600	Active TSS	Breast Myoepithelial Primary Cells	Breast
44	chr8:67836200-67838600	Active TSS	Rectal Smooth Muscle	rectum
45	chr8:67836200-67838600	Active TSS	Right Atrium	heart
46	chr8:67836200-67839000	Active TSS	ES-I3 Cell Line	embryonic stem cell
47	chr8:67836400-67837600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
48	chr8:67836400-67838000	Active TSS	H1 Cell Line	embryonic stem cell
49	chr8:67836400-67838000	Active TSS	Primary T helper cells PMA-I stimulated	--
50	chr8:67836400-67838000	Active TSS	Fetal Intestine Small	intestine

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