Variant report

Variant	rs61361027
Chromosome Location	chr2:63867227-63867228
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10153822	1.00[EUR][1000 genomes]
rs10167957	1.00[EUR][1000 genomes]
rs10175007	1.00[EUR][1000 genomes]
rs10175463	1.00[EUR][1000 genomes]
rs10202649	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11885358	1.00[EUR][1000 genomes]
rs11893294	1.00[EUR][1000 genomes]
rs11896034	1.00[EUR][1000 genomes]
rs13390106	1.00[EUR][1000 genomes]
rs13408481	1.00[EUR][1000 genomes]
rs13411288	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs13415780	1.00[EUR][1000 genomes]
rs13419067	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs13421646	1.00[EUR][1000 genomes]
rs13424973	1.00[EUR][1000 genomes]
rs35012898	1.00[EUR][1000 genomes]
rs6748271	1.00[EUR][1000 genomes]
rs6753773	1.00[EUR][1000 genomes]
rs73934731	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73937816	1.00[EUR][1000 genomes]
rs73937817	1.00[EUR][1000 genomes]
rs7596703	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7607974	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1800788	chr2:63473443-63900292	ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	esv1792289	chr2:63812148-63900292	Weak transcription Strong transcription Genic enhancers Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv963239	chr2:63846496-63877130	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:63866400-63870400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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