Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:18687781..18689370-chr4:18694986..18697418,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10002345	1.00[ASN][1000 genomes]
rs10516328	1.00[ASN][1000 genomes]
rs1125247	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12509919	1.00[ASN][1000 genomes]
rs16897218	1.00[ASN][1000 genomes]
rs16897428	1.00[ASN][1000 genomes]
rs16897436	1.00[ASN][1000 genomes]
rs16897476	1.00[ASN][1000 genomes]
rs1874288	1.00[ASN][1000 genomes]
rs2320980	1.00[ASN][1000 genomes]
rs28393986	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2874415	1.00[ASN][1000 genomes]
rs3924699	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4256223	1.00[ASN][1000 genomes]
rs4296675	1.00[ASN][1000 genomes]
rs4346646	1.00[ASN][1000 genomes]
rs4698236	1.00[ASN][1000 genomes]
rs4698705	1.00[ASN][1000 genomes]
rs55738315	1.00[ASN][1000 genomes]
rs56130703	1.00[ASN][1000 genomes]
rs61040514	1.00[ASN][1000 genomes]
rs6449401	1.00[ASN][1000 genomes]
rs6836177	1.00[ASN][1000 genomes]
rs73104312	1.00[ASN][1000 genomes]
rs73250457	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73250463	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73250464	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73801035	1.00[ASN][1000 genomes]
rs73801036	1.00[ASN][1000 genomes]
rs73801037	1.00[ASN][1000 genomes]
rs73801038	1.00[ASN][1000 genomes]
rs73801048	1.00[ASN][1000 genomes]
rs73801050	1.00[ASN][1000 genomes]
rs7671285	1.00[ASN][1000 genomes]
rs7696154	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003931	chr4:18241575-18849898	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv533087	chr4:18362040-19176896	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv532708	chr4:18596861-19176896	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv878722	chr4:18668957-18741988	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
5	nsv878723	chr4:18668957-19005988	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:18687600-18689000	Enhancers	Fetal Intestine Small	intestine
2	chr4:18687800-18689200	Enhancers	Fetal Intestine Large	intestine
3	chr4:18688000-18697600	Weak transcription	Gastric	stomach
4	chr4:18688200-18691200	Weak transcription	Fetal Lung	lung
5	chr4:18688200-18691400	Weak transcription	Rectal Smooth Muscle	rectum
6	chr4:18688400-18691200	Weak transcription	Fetal Heart	heart
7	chr4:18688600-18689000	Enhancers	Pancreatic Islets	Pancreatic Islet

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