Variant report

Variant	rs73801035
Chromosome Location	chr4:18570720-18570721
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10002345	1.00[ASN][1000 genomes]
rs10516328	1.00[ASN][1000 genomes]
rs1125247	1.00[ASN][1000 genomes]
rs12509919	1.00[ASN][1000 genomes]
rs16897218	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16897428	1.00[ASN][1000 genomes]
rs16897436	1.00[ASN][1000 genomes]
rs16897476	1.00[ASN][1000 genomes]
rs1874288	1.00[ASN][1000 genomes]
rs2320980	1.00[ASN][1000 genomes]
rs28393986	1.00[ASN][1000 genomes]
rs2874415	1.00[ASN][1000 genomes]
rs3924699	1.00[ASN][1000 genomes]
rs4256223	1.00[ASN][1000 genomes]
rs4296675	1.00[ASN][1000 genomes]
rs4346646	1.00[ASN][1000 genomes]
rs4698236	1.00[ASN][1000 genomes]
rs4698705	1.00[ASN][1000 genomes]
rs55738315	1.00[ASN][1000 genomes]
rs56130703	1.00[ASN][1000 genomes]
rs61040514	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61486204	1.00[ASN][1000 genomes]
rs6449401	1.00[ASN][1000 genomes]
rs6836177	1.00[ASN][1000 genomes]
rs73104312	1.00[ASN][1000 genomes]
rs73250457	1.00[ASN][1000 genomes]
rs73250463	1.00[ASN][1000 genomes]
rs73250464	1.00[ASN][1000 genomes]
rs73801036	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73801037	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73801038	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73801048	1.00[ASN][1000 genomes]
rs73801050	1.00[ASN][1000 genomes]
rs7671285	1.00[ASN][1000 genomes]
rs7696154	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003931	chr4:18241575-18849898	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv533087	chr4:18362040-19176896	Enhancers Bivalent Enhancer ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:18568000-18574400	Enhancers	HepG2	liver
2	chr4:18569600-18572600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr4:18570200-18574200	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr4:18570400-18572600	Weak transcription	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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