The 2.0 version of rSNPBase

Variant report

Variant rs61589642
Chromosome Location chr8:67599490-67599491
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:67580200-67601800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr8:67580400-67605000 Weak transcription Stomach Mucosa stomach
3 chr8:67580600-67624400 Weak transcription Aorta Aorta
4 chr8:67580600-67624400 Weak transcription Ovary ovary
5 chr8:67580800-67602200 Weak transcription Brain Inferior Temporal Lobe brain
6 chr8:67580800-67603600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr8:67580800-67604000 Weak transcription Gastric stomach
8 chr8:67580800-67609200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr8:67580800-67609200 Weak transcription Brain Cingulate Gyrus brain
10 chr8:67580800-67623600 Weak transcription Colonic Mucosa Colon
11 chr8:67581000-67624600 Weak transcription Spleen Spleen
12 chr8:67581200-67601800 Weak transcription Brain Substantia Nigra brain
13 chr8:67581200-67601800 Weak transcription HSMMtube muscle
14 chr8:67581400-67601800 Weak transcription Rectal Smooth Muscle rectum
15 chr8:67581400-67602000 Weak transcription Lung lung
16 chr8:67581400-67604200 Weak transcription Right Ventricle heart
17 chr8:67581600-67624000 Weak transcription Fetal Brain Male brain
18 chr8:67582400-67614200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr8:67584800-67602200 Weak transcription Brain Angular Gyrus brain
20 chr8:67587400-67602200 Weak transcription Colon Smooth Muscle Colon
21 chr8:67587600-67609000 Weak transcription A549 lung
22 chr8:67587600-67614200 Weak transcription Fetal Heart heart
23 chr8:67587800-67602200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr8:67588400-67607600 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr8:67590000-67604800 Weak transcription Brain Anterior Caudate brain
26 chr8:67590200-67601800 Weak transcription Thymus Thymus
27 chr8:67590200-67602000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr8:67590200-67602000 Weak transcription Left Ventricle heart
29 chr8:67591000-67601600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr8:67592600-67601200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr8:67592600-67601400 Weak transcription HUVEC blood vessel
32 chr8:67592600-67601800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr8:67592600-67601800 Weak transcription NHEK skin
34 chr8:67592800-67601800 Weak transcription K562 blood
35 chr8:67592800-67601800 Weak transcription NHDF-Ad bronchial
36 chr8:67592800-67602000 Weak transcription NH-A brain
37 chr8:67592800-67602200 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr8:67593000-67600600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr8:67593000-67601800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr8:67593000-67601800 Weak transcription Brain Germinal Matrix brain
41 chr8:67593000-67609200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr8:67593200-67604000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr8:67593200-67604200 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr8:67593600-67601800 Weak transcription GM12878-XiMat blood
45 chr8:67593600-67601800 Weak transcription HMEC breast
46 chr8:67593800-67601400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr8:67593800-67602200 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr8:67594000-67602600 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr8:67594200-67602000 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr8:67594600-67599800 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015