Variant report

Variant	rs7840192
Chromosome Location	chr8:67579795-67579796
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr8:67578435-67580818	K562	blood:	n/a	n/a
2	POLR2A	chr8:67578498-67579916	MCF-7	breast:	n/a	n/a
3	SMC3	chr8:67579458-67580058	HepG2	liver:	n/a	n/a
4	SIX5	chr8:67579290-67579886	K562	blood:	n/a	chr8:67579695-67579704
5	POLR2A	chr8:67579141-67580151	SK-N-MC	brain:	n/a	n/a
6	GABPA	chr8:67579423-67579860	H1-hESC	embryonic stem cell:	n/a	chr8:67579491-67579502 chr8:67579491-67579500 chr8:67579491-67579505 chr8:67579488-67579502
7	MXI1	chr8:67579306-67580038	K562	blood:	n/a	n/a
8	GTF2B	chr8:67579301-67580156	K562	blood:	n/a	n/a
9	NFIC	chr8:67579212-67579956	HepG2	liver:	n/a	n/a
10	POLR2A	chr8:67579584-67580023	A549	lung:	n/a	n/a
11	MAX	chr8:67579140-67580070	MCF-7	breast:	n/a	n/a
12	POLR2A	chr8:67578517-67580295	PFSK-1	brain:	n/a	n/a
13	POLR2A	chr8:67578452-67580090	GM12892	blood:	n/a	n/a
14	POLR2A	chr8:67579129-67580222	Hela-S3	cervix:	n/a	n/a
15	MBD4	chr8:67579194-67580082	HepG2	liver:	n/a	n/a
16	MYC	chr8:67578453-67580537	K562	blood:	n/a	n/a
17	MAFK	chr8:67579273-67580117	Hela-S3	cervix:	n/a	n/a
18	POLR2A	chr8:67578296-67580206	GM12892	blood:	n/a	n/a
19	TAF1	chr8:67579059-67580198	GM12878	blood:	n/a	n/a
20	PML	chr8:67579149-67579974	GM12878	blood:	n/a	n/a
21	MAX	chr8:67579248-67579954	K562	blood:	n/a	n/a
22	ZNF143	chr8:67578747-67580375	Hela-S3	cervix:	n/a	chr8:67579509-67579528 chr8:67579683-67579701 chr8:67579514-67579532 chr8:67579763-67579781
23	CHD2	chr8:67579312-67580112	K562	blood:	n/a	n/a
24	RCOR1	chr8:67579255-67580048	Hela-S3	cervix:	n/a	n/a
25	JUND	chr8:67579266-67579989	H1-hESC	embryonic stem cell:	n/a	chr8:67579423-67579434
26	ZNF143	chr8:67578734-67580129	GM12878	blood:	n/a	chr8:67579509-67579528 chr8:67579683-67579701 chr8:67579514-67579532 chr8:67579763-67579781
27	GABPA	chr8:67579224-67580011	HL-60	blood:	n/a	chr8:67579491-67579502 chr8:67579491-67579500 chr8:67579491-67579505 chr8:67579488-67579502
28	STAT3	chr8:67579328-67580360	GM12878	blood:	n/a	chr8:67579903-67579915 chr8:67580028-67580039
29	BHLHE40	chr8:67578476-67580127	HepG2	liver:	n/a	n/a
30	POLR2A	chr8:67578501-67580108	H1-hESC	embryonic stem cell:	n/a	n/a
31	POLR2A	chr8:67578405-67580298	SK-N-MC	brain:	n/a	n/a
32	SP1	chr8:67579214-67580053	H1-hESC	embryonic stem cell:	n/a	chr8:67579651-67579658 chr8:67580039-67580053 chr8:67579624-67579635 chr8:67579902-67579911
33	SPI1	chr8:67579135-67580044	GM12891	blood:	n/a	chr8:67579902-67579915 chr8:67579800-67579813 chr8:67579319-67579332
34	ELF1	chr8:67578765-67579885	K562	blood:	n/a	chr8:67579340-67579349 chr8:67579624-67579637
35	POLR2A	chr8:67576440-67581499	K562	blood:	n/a	n/a
36	YY1	chr8:67579154-67580057	K562	blood:	n/a	chr8:67579814-67579823
37	EP300	chr8:67579244-67580565	K562	blood:	n/a	chr8:67579360-67579374 chr8:67579802-67579811 chr8:67580192-67580206
38	POLR2A	chr8:67578390-67580114	GM12878	blood:	n/a	n/a
39	GABPA	chr8:67579253-67579979	K562	blood:	n/a	chr8:67579491-67579502 chr8:67579491-67579500 chr8:67579491-67579505 chr8:67579488-67579502
40	PML	chr8:67579126-67580583	K562	blood:	n/a	n/a
41	TBP	chr8:67579160-67580041	H1-hESC	embryonic stem cell:	n/a	n/a
42	PAX5	chr8:67579223-67579942	GM12878	blood:	n/a	chr8:67579360-67579369 chr8:67579801-67579810
43	TAF1	chr8:67579028-67580131	ECC-1	luminal epithelium:	n/a	n/a
44	MAZ	chr8:67579294-67580090	HepG2	liver:	n/a	n/a
45	TEAD4	chr8:67579216-67580349	K562	blood:	n/a	n/a
46	MYC	chr8:67578461-67580376	NB4	blood:	n/a	n/a
47	MAX	chr8:67579210-67579909	HepG2	liver:	n/a	n/a
48	POLR2A	chr8:67578343-67580535	Raji	blood:	n/a	n/a
49	YY1	chr8:67579128-67580240	SK-N-SH	brain:	n/a	chr8:67579814-67579823
50	SIN3AK20	chr8:67578777-67580153	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:67579782-67579832	SK-N-MC	brain:	n/a
2	chr8:67579786-67579836	HCF	heart:	n/a
3	chr8:67579782-67579832	LNCaP	prostate:	n/a
4	chr8:67579786-67579836	HNPCEpiC	eye:	n/a
5	chr8:67579782-67579832	NB4	blood:	n/a
6	chr8:67579786-67579836	HAEpiC	amniotic membrane:	n/a
7	chr8:67579786-67579836	MCF-7	breast:	n/a
8	chr8:67579782-67579832	ovcar-3	ovarian:	n/a
9	chr8:67579786-67579836	HRCEpiC	kidney:	n/a
10	chr8:67579786-67579836	IMR90	lung:	fetal
11	chr8:67579786-67579836	H1-hESC	embryonic stem cell:	embryo
12	chr8:67579782-67579832	MCF10A-Er-Src	breast:	n/a
13	chr8:67579782-67579832	NHDF-neo	bronchial:	n/a
14	chr8:67579786-67579836	SK-N-SH_RA	brain:	n/a
15	chr8:67579786-67579836	AG10803	skin:	n/a
16	chr8:67579786-67579836	HL-60	blood:	n/a
17	chr8:67579786-67579836	AG09309	skin:	n/a
18	chr8:67579786-67579836	K562	blood:	n/a
19	chr8:67579782-67579832	HEEpiC	esophagus:	n/a
20	chr8:67579782-67579832	PANC-1	pancreas:	n/a
21	chr8:67579786-67579836	GM12891	blood:	n/a
22	chr8:67579786-67579836	HEEpiC	esophagus:	n/a
23	chr8:67579782-67579832	SKMC	muscle:	n/a
24	chr8:67579786-67579836	GM06990	blood:	n/a
25	chr8:67579786-67579836	RPTEC	kidney:	n/a
26	chr8:67579782-67579832	AG04449	skin:	fetal
27	chr8:67579782-67579832	HCPEpiC	choroid plexus:	n/a
28	chr8:67579786-67579836	ProgFib	skin:	n/a
29	chr8:67579786-67579836	PFSK-1	brain:	n/a
30	chr8:67579782-67579832	IMR90	lung:	fetal
31	chr8:67579786-67579836	HCPEpiC	choroid plexus:	n/a
32	chr8:67579786-67579836	HUVEC	blood vessel:	n/a
33	chr8:67579782-67579832	Hela-S3	cervix:	n/a
34	chr8:67579782-67579832	GM12891	blood:	n/a
35	chr8:67579782-67579832	AG09309	skin:	n/a
36	chr8:67579786-67579836	HCT-116	colon:	n/a
37	chr8:67579782-67579832	NH-A	brain:	n/a
38	chr8:67579782-67579832	HNPCEpiC	eye:	n/a
39	chr8:67579786-67579836	NT2-D1	testis:	n/a
40	chr8:67579786-67579836	MCF10A-Er-Src	breast:	n/a
41	chr8:67579782-67579832	HCM	heart:	n/a
42	chr8:67579786-67579836	PANC-1	pancreas:	n/a
43	chr8:67579786-67579836	AoSMC	blood vessel:	n/a
44	chr8:67579782-67579832	HPAEpiC	pulmonary alveolar:	n/a
45	chr8:67579786-67579836	AG04450	lung:	fetal
46	chr8:67579782-67579832	ProgFib	skin:	n/a
47	chr8:67579786-67579836	U87	brain:	n/a
48	chr8:67579786-67579836	SAEC	small airway:	n/a
49	chr8:67579786-67579836	HRE	kidney:	n/a
50	chr8:67579782-67579832	Hepatocyte	liver:	n/a

No.	Distal block	Cell Line	Cell type
1	chr8:67523974..67528801-chr8:67579151..67581998,7	K562	blood:
2	chr8:67576102..67584643-chr8:67586059..67596736,15	K562	blood:
3	chr8:67524099..67528801-chr8:67579151..67581449,5	K562	blood:
4	chr8:67574105..67581178-chr8:67622567..67628099,10	MCF-7	breast:
5	chr8:67578996..67582751-chr8:67973027..67976256,4	K562	blood:
6	chr11:18415810..18416651-chr8:67579307..67579955,2	Hela-S3	cervix:
7	chr8:67385031..67386596-chr8:67579677..67581320,2	K562	blood:
8	chr8:67578786..67582158-chr8:67585357..67589130,4	K562	blood:

Variant related genes	Relation type
C8orf44	TF binding region
C8orf44-SGK3	TF binding region
VCPIP1	TF binding region
C8orf44	CpG island
VCPIP1	CpG island
C8orf44-SGK3	CpG island
ENSG00000185697	Chromatin interaction
ENSG00000134333	Chromatin interaction
ENSG00000104218	Chromatin interaction
ENSG00000121022	Chromatin interaction
ENSG00000169085	Chromatin interaction
ENSG00000213865	Chromatin interaction
ENSG00000104205	Chromatin interaction

Extended variants
information (count: 125 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:123)

rs_ID	r²[population]
rs10283103	1.00[CHB][hapmap];1.00[CHD][hapmap]
rs10504393	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11985572	1.00[CEU][hapmap]
rs11986831	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11987253	1.00[EUR][1000 genomes]
rs11987254	1.00[EUR][1000 genomes]
rs11987271	0.96[EUR][1000 genomes]
rs11987311	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11988213	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11990322	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11990331	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs11990636	1.00[CEU][hapmap]
rs11992252	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11992295	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11993306	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs11993354	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs11994827	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11995031	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11995253	0.81[EUR][1000 genomes]
rs11995256	1.00[CEU][hapmap]
rs11995291	0.85[EUR][1000 genomes]
rs11996861	1.00[CEU][hapmap]
rs11997260	1.00[CEU][hapmap]
rs11997554	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11997967	1.00[CEU][hapmap]
rs11998194	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11998301	1.00[CEU][hapmap]
rs12114734	1.00[CEU][hapmap]
rs12114868	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16932983	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs16932985	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes]
rs16932996	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs16933013	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16933026	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16933032	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16933034	1.00[CEU][hapmap]
rs16933036	1.00[CEU][hapmap]
rs16933039	1.00[CEU][hapmap]
rs16933057	1.00[CEU][hapmap]
rs16933060	1.00[CEU][hapmap]
rs16933065	1.00[CEU][hapmap]
rs16933071	1.00[CEU][hapmap]
rs16933079	1.00[CEU][hapmap]
rs16933080	1.00[CEU][hapmap]
rs2357998	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2358000	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.85[EUR][1000 genomes]
rs28432871	0.83[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs28572179	0.85[EUR][1000 genomes]
rs28589429	0.85[EUR][1000 genomes]
rs34301114	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35078037	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35353562	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35517376	1.00[CEU][hapmap]
rs3808602	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3824258	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes]
rs3857962	1.00[CEU][hapmap]
rs3913346	1.00[CEU][hapmap]
rs3929419	1.00[CEU][hapmap]
rs4345540	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4534119	1.00[CEU][hapmap]
rs56682762	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56742359	0.85[EUR][1000 genomes]
rs56810217	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56911449	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57125106	0.96[EUR][1000 genomes]
rs57351080	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57858031	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58454063	0.85[EUR][1000 genomes]
rs58806068	0.85[EUR][1000 genomes]
rs59058682	1.00[ASN][1000 genomes]
rs59089124	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59410806	1.00[EUR][1000 genomes]
rs59643912	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60165103	0.80[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs60655524	0.80[EUR][1000 genomes]
rs60784079	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61469007	0.85[EUR][1000 genomes]
rs61589642	1.00[ASN][1000 genomes]
rs6472285	1.00[CEU][hapmap]
rs6982202	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6982407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6983632	1.00[CEU][hapmap]
rs6985273	1.00[CEU][hapmap]
rs6986439	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6986940	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6987665	1.00[CEU][hapmap]
rs6988670	0.85[EUR][1000 genomes]
rs6991992	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998252	1.00[CEU][hapmap]
rs6998505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998718	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6998777	1.00[CEU][hapmap]
rs7002479	1.00[CEU][hapmap]
rs7003548	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7008740	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[EUR][1000 genomes]
rs7015619	1.00[CEU][hapmap]
rs7017471	1.00[CEU][hapmap]
rs73248113	0.85[EUR][1000 genomes]
rs73248122	0.85[EUR][1000 genomes]
rs73248134	0.85[EUR][1000 genomes]
rs73248138	0.85[EUR][1000 genomes]
rs73250233	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73250238	1.00[EUR][1000 genomes]
rs73250241	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73250244	1.00[EUR][1000 genomes]
rs73250249	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73250250	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73250252	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73250262	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73251887	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73253909	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73253915	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73253964	1.00[ASN][1000 genomes]
rs73253968	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73261704	0.85[EUR][1000 genomes]
rs73261763	0.85[EUR][1000 genomes]
rs73261767	0.85[EUR][1000 genomes]
rs7820420	1.00[CHB][hapmap]
rs7828492	0.85[EUR][1000 genomes]
rs7830436	0.85[EUR][1000 genomes]
rs7844944	0.85[EUR][1000 genomes]
rs957655	1.00[CHB][hapmap]
rs979679	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	nsv831346	chr8:67486555-67675324	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67574600-67580600	Active TSS	Aorta	Aorta
2	chr8:67578200-67580600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr8:67578200-67580600	Active TSS	Ovary	ovary
4	chr8:67578200-67580800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr8:67578200-67581000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr8:67578200-67581400	Active TSS	ES-I3 Cell Line	embryonic stem cell
7	chr8:67578400-67580200	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
8	chr8:67578400-67580200	Active TSS	Esophagus	oesophagus
9	chr8:67578400-67580400	Active TSS	Primary T killer memory cells from peripheral blood	blood
10	chr8:67578400-67580400	Active TSS	Colon Smooth Muscle	Colon
11	chr8:67578400-67580400	Active TSS	Small Intestine	intestine
12	chr8:67578400-67580400	Active TSS	Stomach Mucosa	stomach
13	chr8:67578400-67580600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr8:67578400-67580600	Active TSS	Fetal Intestine Large	intestine
15	chr8:67578400-67580600	Active TSS	Fetal Intestine Small	intestine
16	chr8:67578400-67580600	Active TSS	GM12878-XiMat	blood
17	chr8:67578400-67580600	Active TSS	HSMM	muscle
18	chr8:67578400-67580800	Active TSS	H9 Cell Line	embryonic stem cell
19	chr8:67578400-67580800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr8:67578400-67580800	Active TSS	HUES64 Cell Line	embryonic stem cell
21	chr8:67578400-67580800	Active TSS	iPS-15b Cell Line	embryonic stem cell
22	chr8:67578400-67580800	Active TSS	iPS-20b Cell Line	embryonic stem cell
23	chr8:67578400-67580800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
24	chr8:67578400-67580800	Active TSS	Pancreatic Islets	Pancreatic Islet
25	chr8:67578400-67580800	Active TSS	Gastric	stomach
26	chr8:67578400-67580800	Active TSS	Psoas Muscle	Psoas
27	chr8:67578400-67580800	Bivalent/Poised TSS	HepG2	liver
28	chr8:67578400-67581200	Active TSS	HUES48 Cell Line	embryonic stem cell
29	chr8:67578400-67581200	Active TSS	A549	lung
30	chr8:67578400-67581400	Active TSS	Muscle Satellite Cultured Cells	--
31	chr8:67578600-67579800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr8:67578600-67580000	Active TSS	Primary monocytes fromperipheralblood	blood
33	chr8:67578600-67580200	Active TSS	Primary hematopoietic stem cells	blood
34	chr8:67578600-67580200	Active TSS	Primary T helper naive cells from peripheral blood	blood
35	chr8:67578600-67580200	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
36	chr8:67578600-67580200	Active TSS	Primary T helper cells PMA-I stimulated	--
37	chr8:67578600-67580200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr8:67578600-67580200	Active TSS	Brain Angular Gyrus	brain
39	chr8:67578600-67580200	Active TSS	Brain Anterior Caudate	brain
40	chr8:67578600-67580200	Active TSS	Duodenum Mucosa	Duodenum
41	chr8:67578600-67580200	Active TSS	Fetal Brain Female	brain
42	chr8:67578600-67580200	Active TSS	Placenta Amnion	Placenta Amnion
43	chr8:67578600-67580200	Active TSS	Rectal Smooth Muscle	rectum
44	chr8:67578600-67580200	Active TSS	Spleen	Spleen
45	chr8:67578600-67580200	Active TSS	HUVEC	blood vessel
46	chr8:67578600-67580200	Active TSS	Monocytes-CD14+_RO01746	blood
47	chr8:67578600-67580200	Active TSS	NH-A	brain
48	chr8:67578600-67580200	Active TSS	Osteobl	bone
49	chr8:67578600-67580400	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr8:67578600-67580400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell

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