Variant report

Variant rs61635147
Chromosome Location chr19:56978298-56978299
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56957200-56987400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr19:56957400-56985000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
3 chr19:56957400-56987400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
4 chr19:56957400-56987400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:56966400-56979800 ZNF genes & repeats Ovary ovary
6 chr19:56967200-56987600 Weak transcription Fetal Heart heart
7 chr19:56969400-56987600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr19:56970200-56981400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr19:56972800-56987600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr19:56973000-56981400 Weak transcription H1 Cell Line embryonic stem cell
11 chr19:56973000-56981600 Weak transcription Placenta Amnion Placenta Amnion
12 chr19:56973200-56981000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr19:56973400-56981600 Weak transcription Psoas Muscle Psoas
14 chr19:56973400-56983600 Weak transcription Dnd41 blood
15 chr19:56973600-56981800 Weak transcription Left Ventricle heart
16 chr19:56974000-56981000 Weak transcription Fetal Muscle Trunk muscle
17 chr19:56974000-56981400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:56974000-56981600 Weak transcription Right Ventricle heart
19 chr19:56975600-56978600 ZNF genes & repeats Fetal Brain Female brain
20 chr19:56975600-56979600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
21 chr19:56975600-56985200 ZNF genes & repeats Brain Germinal Matrix brain
22 chr19:56975600-56987200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
23 chr19:56976400-56979800 Weak transcription Brain Cingulate Gyrus brain
24 chr19:56976800-56987200 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
25 chr19:56977000-56980000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
26 chr19:56977400-56981400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:56977600-56981000 Weak transcription Brain Anterior Caudate brain
28 chr19:56978000-56984400 ZNF genes & repeats Adipose Nuclei Adipose
29 chr19:56978200-56978800 ZNF genes & repeats Colonic Mucosa Colon
30 chr19:56978200-56978800 Strong transcription Stomach Smooth Muscle stomach
31 chr19:56978200-56979400 Weak transcription Fetal Brain Male brain

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