The 2.0 version of rSNPBase

Variant report

Variant rs61882416
Chromosome Location chr11:17862913-17862914
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17806800-17867400 Weak transcription Primary B cells from cord blood blood
2 chr11:17833800-17867400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr11:17835000-17869400 Weak transcription Fetal Intestine Small intestine
4 chr11:17835200-17884200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr11:17838400-17971600 Weak transcription Gastric stomach
6 chr11:17850400-17866200 Weak transcription Aorta Aorta
7 chr11:17851200-17867000 Weak transcription Primary T cells from cord blood blood
8 chr11:17851600-17890800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr11:17852200-17867800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr11:17852200-17875800 Weak transcription Esophagus oesophagus
11 chr11:17853000-17870800 Weak transcription Spleen Spleen
12 chr11:17853800-17882400 Weak transcription Pancreas Pancrea
13 chr11:17854400-17867400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr11:17856000-17867000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr11:17856400-17866000 Weak transcription HepG2 liver
16 chr11:17858800-17893200 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr11:17859200-17864800 Enhancers Skeletal Muscle Male skeletal muscle
18 chr11:17859400-17863000 Enhancers Psoas Muscle Psoas
19 chr11:17859400-17864400 Enhancers Skeletal Muscle Female skeletal muscle
20 chr11:17860000-17873600 Weak transcription Right Ventricle heart
21 chr11:17861000-17863400 Enhancers Fetal Muscle Leg muscle
22 chr11:17861400-17867400 Weak transcription Left Ventricle heart
23 chr11:17861600-17866800 Weak transcription Brain Anterior Caudate brain
24 chr11:17861800-17864600 Weak transcription Brain Substantia Nigra brain
25 chr11:17861800-17866800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr11:17862000-17866800 Weak transcription HSMMtube muscle
27 chr11:17862000-17866800 Weak transcription Osteobl bone
28 chr11:17862000-17867400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr11:17862200-17864200 Weak transcription Brain Hippocampus Middle brain
30 chr11:17862200-17866400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr11:17862200-17866400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr11:17862200-17866600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:17862200-17866600 Weak transcription Muscle Satellite Cultured Cells --
34 chr11:17862200-17866600 Weak transcription HSMM muscle
35 chr11:17862200-17866800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:17862200-17867400 Weak transcription Brain Cingulate Gyrus brain
37 chr11:17862200-17868200 Weak transcription Brain Angular Gyrus brain
38 chr11:17862200-17868600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr11:17862200-17889000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr11:17862200-17895400 Weak transcription Duodenum Mucosa Duodenum
41 chr11:17862400-17864200 Weak transcription Brain Inferior Temporal Lobe brain
42 chr11:17862400-17866600 Weak transcription HMEC breast
43 chr11:17862400-17867400 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr11:17862400-17867600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr11:17862400-17867800 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015