The 2.0 version of rSNPBase

Variant report

Variant rs62062273
Chromosome Location chr17:44092243-44092244
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44052000-44102600 Weak transcription Right Ventricle heart
2 chr17:44081800-44104800 Weak transcription Right Atrium heart
3 chr17:44083400-44095600 Weak transcription Pancreas Pancrea
4 chr17:44085600-44104600 Weak transcription Fetal Brain Male brain
5 chr17:44087600-44097600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr17:44087800-44103800 Weak transcription NH-A brain
7 chr17:44088600-44099200 Weak transcription A549 lung
8 chr17:44090200-44092600 Enhancers Fetal Muscle Leg muscle
9 chr17:44090600-44098400 Weak transcription Stomach Smooth Muscle stomach
10 chr17:44090800-44093200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr17:44091200-44095200 Weak transcription Lung lung
12 chr17:44091200-44098600 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr17:44091400-44097600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr17:44091600-44098200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr17:44091600-44100200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr17:44091800-44092400 Enhancers HepG2 liver
17 chr17:44091800-44094400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr17:44091800-44095600 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr17:44091800-44095600 Weak transcription Fetal Brain Female brain
20 chr17:44091800-44095600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr17:44091800-44095800 Weak transcription Brain Angular Gyrus brain
22 chr17:44091800-44095800 Weak transcription Brain Germinal Matrix brain
23 chr17:44091800-44097600 Weak transcription Adipose Nuclei Adipose
24 chr17:44091800-44098800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr17:44091800-44099600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr17:44091800-44099800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr17:44091800-44100000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr17:44091800-44100000 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr17:44091800-44102200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr17:44091800-44102200 Weak transcription Placenta Amnion Placenta Amnion
31 chr17:44091800-44103200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr17:44092000-44093200 Weak transcription Brain Hippocampus Middle brain
33 chr17:44092000-44094000 Weak transcription HSMM muscle
34 chr17:44092000-44094200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr17:44092000-44094200 Weak transcription HSMMtube muscle
36 chr17:44092000-44095600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr17:44092000-44095600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr17:44092000-44095600 Weak transcription Brain Substantia Nigra brain
39 chr17:44092000-44095800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr17:44092000-44095800 Weak transcription Brain Anterior Caudate brain
41 chr17:44092000-44095800 Weak transcription Brain Cingulate Gyrus brain
42 chr17:44092000-44095800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr17:44092000-44095800 Weak transcription Fetal Stomach stomach
44 chr17:44092000-44095800 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr17:44092000-44097600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr17:44092000-44098600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr17:44092000-44099600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr17:44092000-44100000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr17:44092000-44102000 Weak transcription NHLF lung
50 chr17:44092000-44102200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015