No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
esv2752729 |
chr19:20818886-21169554 |
ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
19 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1062776 |
chr19:20818886-21273361 |
Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
32 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv932110 |
chr19:20818886-21278952 |
Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
32 gene(s)
|
inside rSNPs
|
diseases
|
4 |
esv2763043 |
chr19:20818886-21290543 |
Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
32 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv1063954 |
chr19:21000562-21177577 |
Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
8 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv578946 |
chr19:21014403-21151796 |
ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
6 gene(s)
|
inside rSNPs
|
diseases
|
7 |
esv3385528 |
chr19:21030777-21495566 |
Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
32 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv960809 |
chr19:21031718-21121801 |
Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
9 |
esv3380168 |
chr19:21032661-21103629 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
10 |
nsv1055738 |
chr19:21040181-21109969 |
Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
11 |
esv3348077 |
chr19:21041161-21103393 |
ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Weak transcription
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
12 |
nsv522090 |
chr19:21041350-21109784 |
ZNF genes & repeats Active TSS Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
13 |
nsv578947 |
chr19:21041350-21109784 |
Active TSS ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
14 |
nsv817536 |
chr19:21041855-21348237 |
Strong transcription Enhancers Genic enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
25 gene(s)
|
inside rSNPs
|
diseases
|
15 |
nsv515576 |
chr19:21052924-21101749 |
Active TSS ZNF genes & repeats Weak transcription
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
16 |
nsv1067258 |
chr19:21053665-21100586 |
ZNF genes & repeats Active TSS Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
17 |
nsv1057237 |
chr19:21053665-21104492 |
ZNF genes & repeats Weak transcription Active TSS
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
18 |
nsv1062802 |
chr19:21053665-21109969 |
Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
19 |
nsv1067455 |
chr19:21053665-21141787 |
Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
2 gene(s)
|
inside rSNPs
|
diseases
|
20 |
nsv1058430 |
chr19:21063759-21114796 |
Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
21 |
esv3526725 |
chr19:21074300-21097346 |
ZNF genes & repeats Weak transcription Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
22 |
esv3526726 |
chr19:21074300-21097346 |
ZNF genes & repeats Weak transcription Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
23 |
esv3446269 |
chr19:21084712-21097310 |
Weak transcription ZNF genes & repeats Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
24 |
esv3372408 |
chr19:21094312-21098810 |
ZNF genes & repeats Weak transcription
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|