The 2.0 version of rSNPBase

Variant report

Variant rs62261493
Chromosome Location chr3:105480105-105480106
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105464800-105482600 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:105465800-105483400 Weak transcription Rectal Smooth Muscle rectum
3 chr3:105466000-105481200 Weak transcription Fetal Kidney kidney
4 chr3:105466600-105481400 Weak transcription HepG2 liver
5 chr3:105467600-105480800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr3:105467600-105509400 Weak transcription Stomach Mucosa stomach
7 chr3:105472200-105499000 Weak transcription NHDF-Ad bronchial
8 chr3:105472400-105504400 Weak transcription HUVEC blood vessel
9 chr3:105472800-105480200 Weak transcription Muscle Satellite Cultured Cells --
10 chr3:105473000-105481400 Weak transcription NH-A brain
11 chr3:105474600-105483200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr3:105475200-105483000 Strong transcription Osteobl bone
13 chr3:105475200-105485600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr3:105475800-105483000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr3:105476000-105486600 Weak transcription Psoas Muscle Psoas
16 chr3:105476200-105480400 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:105476400-105480400 Weak transcription Small Intestine intestine
18 chr3:105476400-105480600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr3:105477000-105481200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr3:105477600-105482800 Weak transcription Stomach Smooth Muscle stomach
21 chr3:105477800-105486800 Weak transcription Colon Smooth Muscle Colon
22 chr3:105478000-105480400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr3:105478000-105481200 Weak transcription Brain Substantia Nigra brain
24 chr3:105478200-105495400 Weak transcription HSMMtube muscle
25 chr3:105478400-105481000 Weak transcription Adipose Nuclei Adipose
26 chr3:105478400-105481200 Weak transcription Brain Cingulate Gyrus brain
27 chr3:105478400-105481200 Weak transcription Colonic Mucosa Colon
28 chr3:105478400-105481200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr3:105478600-105480400 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr3:105478600-105480400 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr3:105478600-105480600 Weak transcription Fetal Lung lung
32 chr3:105478600-105480800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr3:105478600-105480800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr3:105478600-105480800 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr3:105478600-105481000 Weak transcription Liver Liver
36 chr3:105478600-105481200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr3:105478600-105481400 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr3:105478600-105481400 Weak transcription Gastric stomach
39 chr3:105478600-105486600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr3:105478600-105509400 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr3:105478600-105511200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr3:105478800-105480200 Weak transcription Primary B cells from peripheral blood blood
43 chr3:105478800-105480200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr3:105478800-105480400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr3:105478800-105480400 Weak transcription Primary B cells from cord blood blood
46 chr3:105478800-105480400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr3:105478800-105480600 Weak transcription Primary hematopoietic stem cells blood
48 chr3:105478800-105480600 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr3:105478800-105480600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr3:105478800-105480600 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015