The 2.0 version of rSNPBase

Variant report

Variant rs62261498
Chromosome Location chr3:105492182-105492183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105467600-105509400 Weak transcription Stomach Mucosa stomach
2 chr3:105472200-105499000 Weak transcription NHDF-Ad bronchial
3 chr3:105472400-105504400 Weak transcription HUVEC blood vessel
4 chr3:105478200-105495400 Weak transcription HSMMtube muscle
5 chr3:105478600-105509400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:105478600-105511200 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr3:105478800-105496200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr3:105481200-105500800 Weak transcription Small Intestine intestine
9 chr3:105481400-105509600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr3:105481600-105498000 Weak transcription NH-A brain
11 chr3:105481800-105507400 Weak transcription HSMM muscle
12 chr3:105482000-105492400 Weak transcription HepG2 liver
13 chr3:105482000-105496200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr3:105482000-105496200 Weak transcription Lung lung
15 chr3:105482000-105503800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr3:105482000-105509200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr3:105482000-105509600 Weak transcription Ovary ovary
18 chr3:105482000-105510800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:105482000-105511200 Weak transcription Aorta Aorta
20 chr3:105482200-105494600 Weak transcription Fetal Muscle Trunk muscle
21 chr3:105482400-105493600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr3:105482400-105494400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr3:105482400-105500000 Weak transcription Fetal Stomach stomach
24 chr3:105482800-105517400 Weak transcription Fetal Intestine Large intestine
25 chr3:105483200-105506200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr3:105483200-105555200 Weak transcription Placenta Placenta
27 chr3:105484800-105494600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr3:105485200-105492400 Weak transcription Osteobl bone
29 chr3:105486800-105492600 Enhancers Primary T helper cells PMA-I stimulated --
30 chr3:105486800-105493000 Weak transcription Primary hematopoietic stem cells blood
31 chr3:105486800-105493200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr3:105486800-105519000 Weak transcription Esophagus oesophagus
33 chr3:105487000-105492800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr3:105487000-105493200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr3:105487000-105497400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr3:105487000-105508400 Weak transcription Fetal Lung lung
37 chr3:105487200-105493000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr3:105487200-105508400 Weak transcription Fetal Kidney kidney
39 chr3:105487400-105494400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr3:105487400-105494800 Weak transcription Duodenum Mucosa Duodenum
41 chr3:105487400-105500600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr3:105487400-105504200 Weak transcription Fetal Heart heart
43 chr3:105489000-105493200 Weak transcription Primary B cells from cord blood blood
44 chr3:105489400-105506000 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr3:105489600-105492600 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr3:105489600-105494400 Weak transcription Fetal Muscle Leg muscle
47 chr3:105489600-105494800 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr3:105489600-105509600 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr3:105489600-105525400 Weak transcription Fetal Intestine Small intestine
50 chr3:105489800-105492600 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015