The 2.0 version of rSNPBase

Variant report

Variant rs62263169
Chromosome Location chr3:105539643-105539644
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:105483200-105555200 Weak transcription Placenta Placenta
2 chr3:105505000-105548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:105511400-105566400 Weak transcription Aorta Aorta
4 chr3:105519200-105541600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr3:105521200-105546800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr3:105521400-105541200 Weak transcription Fetal Muscle Leg muscle
7 chr3:105521400-105542000 Weak transcription Fetal Stomach stomach
8 chr3:105522400-105541200 Weak transcription Primary T cells from cord blood blood
9 chr3:105524600-105541600 Weak transcription Right Atrium heart
10 chr3:105525600-105540200 Weak transcription NHLF lung
11 chr3:105526200-105541600 Weak transcription Primary hematopoietic stem cells blood
12 chr3:105526200-105542400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr3:105528400-105541600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr3:105528400-105542000 Weak transcription Pancreas Pancrea
15 chr3:105528400-105543200 Weak transcription Gastric stomach
16 chr3:105528400-105553600 Weak transcription Fetal Kidney kidney
17 chr3:105528600-105542600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr3:105528800-105540000 Weak transcription Fetal Heart heart
19 chr3:105528800-105540200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr3:105528800-105541600 Weak transcription Brain Hippocampus Middle brain
21 chr3:105529000-105540000 Weak transcription Duodenum Mucosa Duodenum
22 chr3:105529000-105541600 Weak transcription Fetal Lung lung
23 chr3:105529000-105541800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr3:105529000-105542200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr3:105529000-105546600 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr3:105530400-105540400 Weak transcription Adipose Nuclei Adipose
27 chr3:105530400-105541600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr3:105530400-105542000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr3:105530600-105540400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr3:105530600-105541800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr3:105530800-105541800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr3:105531400-105540200 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr3:105531400-105540200 Weak transcription HSMMtube muscle
34 chr3:105531400-105546600 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr3:105531600-105540400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:105531600-105541800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr3:105531600-105541800 Weak transcription HMEC breast
38 chr3:105531600-105546400 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr3:105532000-105540000 Weak transcription Muscle Satellite Cultured Cells --
40 chr3:105532200-105540600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr3:105532200-105541800 Weak transcription Rectal Smooth Muscle rectum
42 chr3:105532200-105563000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr3:105532800-105540200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr3:105532800-105541200 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr3:105532800-105542000 Weak transcription HUVEC blood vessel
46 chr3:105533000-105540400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr3:105533200-105541200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr3:105533600-105560600 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr3:105533800-105540400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:105533800-105570000 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015