Variant report

Variant	rs62284872
Chromosome Location	chr3:155726218-155726219
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:155723529..155726254-chr3:155754834..155758611,3	K562	blood:

Variant related genes	Relation type
ENSG00000169282	Chromatin interaction

Extended variants
information (count: 121 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:121)

rs_ID	r²[population]
rs10513485	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12485698	0.85[EUR][1000 genomes]
rs12485701	0.85[EUR][1000 genomes]
rs12485735	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12485742	0.85[EUR][1000 genomes]
rs12485802	0.85[EUR][1000 genomes]
rs12486102	0.85[EUR][1000 genomes]
rs12486189	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12486864	0.85[EUR][1000 genomes]
rs12487275	0.80[EUR][1000 genomes]
rs12489430	0.85[EUR][1000 genomes]
rs12490114	0.85[EUR][1000 genomes]
rs12491178	0.85[EUR][1000 genomes]
rs12492156	0.85[EUR][1000 genomes]
rs12492258	0.85[EUR][1000 genomes]
rs12493409	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12493654	0.80[EUR][1000 genomes]
rs12493764	0.85[EUR][1000 genomes]
rs12493934	0.85[EUR][1000 genomes]
rs12493963	0.85[EUR][1000 genomes]
rs12494104	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12494143	0.85[EUR][1000 genomes]
rs12494730	0.85[EUR][1000 genomes]
rs12495418	0.85[EUR][1000 genomes]
rs12496006	0.85[EUR][1000 genomes]
rs12496097	0.80[EUR][1000 genomes]
rs12496896	0.85[EUR][1000 genomes]
rs12497735	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12497838	0.85[EUR][1000 genomes]
rs13088748	0.80[EUR][1000 genomes]
rs1533443	0.85[EUR][1000 genomes]
rs16825551	0.85[EUR][1000 genomes]
rs16825554	0.85[EUR][1000 genomes]
rs16825557	0.81[EUR][1000 genomes]
rs16825602	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1878212	0.85[EUR][1000 genomes]
rs2068601	0.85[EUR][1000 genomes]
rs2292716	0.85[EUR][1000 genomes]
rs34340793	0.95[EUR][1000 genomes]
rs35247619	0.83[EUR][1000 genomes]
rs3732399	0.85[EUR][1000 genomes]
rs3772114	0.85[EUR][1000 genomes]
rs3804769	0.80[EUR][1000 genomes]
rs4108611	0.85[EUR][1000 genomes]
rs41267913	0.85[EUR][1000 genomes]
rs59255899	0.80[EUR][1000 genomes]
rs61750368	0.85[EUR][1000 genomes]
rs61750369	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62284864	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62284869	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62284871	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62284876	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs62284877	0.92[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs62286780	0.95[EUR][1000 genomes]
rs62286783	0.80[EUR][1000 genomes]
rs62286784	0.95[EUR][1000 genomes]
rs62286785	0.80[EUR][1000 genomes]
rs62286786	0.95[EUR][1000 genomes]
rs62286788	0.80[EUR][1000 genomes]
rs62286792	0.80[EUR][1000 genomes]
rs62286793	0.80[EUR][1000 genomes]
rs62286794	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62286795	0.85[EUR][1000 genomes]
rs62286796	0.83[EUR][1000 genomes]
rs62286797	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62286799	0.85[EUR][1000 genomes]
rs62286800	0.85[EUR][1000 genomes]
rs62286801	0.85[EUR][1000 genomes]
rs62286804	0.85[EUR][1000 genomes]
rs62286806	0.85[EUR][1000 genomes]
rs62286833	0.85[EUR][1000 genomes]
rs62286834	0.85[EUR][1000 genomes]
rs62286835	0.85[EUR][1000 genomes]
rs62286836	0.85[EUR][1000 genomes]
rs62286837	0.85[EUR][1000 genomes]
rs62286838	0.85[EUR][1000 genomes]
rs62286839	0.85[EUR][1000 genomes]
rs62286840	0.85[EUR][1000 genomes]
rs62286841	0.85[EUR][1000 genomes]
rs62286842	0.85[EUR][1000 genomes]
rs62286843	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62286844	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62286845	0.85[EUR][1000 genomes]
rs62286846	0.85[EUR][1000 genomes]
rs62286847	0.85[EUR][1000 genomes]
rs62286849	0.85[EUR][1000 genomes]
rs62286850	0.85[EUR][1000 genomes]
rs62286851	0.85[EUR][1000 genomes]
rs62286852	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62286853	0.85[EUR][1000 genomes]
rs62286854	0.85[EUR][1000 genomes]
rs62286858	0.85[EUR][1000 genomes]
rs62287763	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287800	0.85[EUR][1000 genomes]
rs62287801	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287803	0.85[EUR][1000 genomes]
rs62287804	0.85[EUR][1000 genomes]
rs62287805	0.85[EUR][1000 genomes]
rs62287807	0.85[EUR][1000 genomes]
rs62287808	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287809	0.83[EUR][1000 genomes]
rs62287811	0.81[EUR][1000 genomes]
rs62287812	0.85[EUR][1000 genomes]
rs62287813	0.85[EUR][1000 genomes]
rs62287814	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287819	0.83[EUR][1000 genomes]
rs62287820	0.85[EUR][1000 genomes]
rs62287821	0.85[EUR][1000 genomes]
rs62287822	0.85[EUR][1000 genomes]
rs62287823	0.85[EUR][1000 genomes]
rs62287824	0.85[EUR][1000 genomes]
rs62287825	0.85[EUR][1000 genomes]
rs62287826	0.85[EUR][1000 genomes]
rs62287827	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287829	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287855	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62287856	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs73873435	0.80[EUR][1000 genomes]
rs968199	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9820541	0.85[EUR][1000 genomes]
rs9826666	0.86[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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