Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:78530875..78532515-chr4:78534945..78537935,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1052563	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11730731	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17002731	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17002732	0.80[ASN][1000 genomes]
rs17002734	0.80[ASN][1000 genomes]
rs17002735	0.80[ASN][1000 genomes]
rs1875266	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs41349845	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41439345	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41530748	0.93[ASN][1000 genomes]
rs57024191	0.93[ASN][1000 genomes]
rs57142024	0.93[ASN][1000 genomes]
rs57792330	0.93[ASN][1000 genomes]
rs58647525	0.93[ASN][1000 genomes]
rs59040560	0.93[ASN][1000 genomes]
rs59647595	0.93[ASN][1000 genomes]
rs61185792	0.93[ASN][1000 genomes]
rs62304086	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62304089	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62304092	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62304095	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs62304097	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62304099	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6852489	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72861970	0.93[ASN][1000 genomes]
rs72861971	0.93[ASN][1000 genomes]
rs72861972	0.93[ASN][1000 genomes]
rs72861973	0.93[ASN][1000 genomes]
rs72861975	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829975	chr4:78426210-78565198	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv1010104	chr4:78520674-78553754	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
3	nsv461560	chr4:78534857-78563584	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv594699	chr4:78534857-78563584	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78529600-78540000	Weak transcription	Right Atrium	heart
2	chr4:78532000-78544000	Weak transcription	Fetal Lung	lung
3	chr4:78535200-78539600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr4:78535200-78539800	Weak transcription	Left Ventricle	heart
5	chr4:78535200-78539800	Weak transcription	Skeletal Muscle Male	skeletal muscle

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