Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs17002731	0.87[ASN][1000 genomes]
rs17002732	0.87[ASN][1000 genomes]
rs17002734	0.87[ASN][1000 genomes]
rs17002735	0.87[ASN][1000 genomes]
rs41530748	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57024191	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57142024	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs57792330	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs58167062	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs58647525	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59040560	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs59647595	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61185792	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs62304096	0.93[ASN][1000 genomes]
rs6852489	0.93[ASN][1000 genomes]
rs72861970	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72861971	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72861972	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72861973	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72861980	0.84[AFR][1000 genomes]
rs72861984	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829975	chr4:78426210-78565198	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv1010104	chr4:78520674-78553754	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78523600-78526200	Weak transcription	Liver	Liver
2	chr4:78526000-78526200	Enhancers	Brain Germinal Matrix	brain

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