Variant report

Variant	rs62482299
Chromosome Location	chr7:103519151-103519152
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:103517390..103519695-chr7:103666602..103669150,2	K562	blood:
2	chr7:103517969..103520327-chr7:103557139..103559343,2	K562	blood:

Extended variants
information (count: 86 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:85)

rs_ID	r²[population]
rs13232518	0.85[ASN][1000 genomes]
rs13232645	0.83[ASN][1000 genomes]
rs13232747	0.85[ASN][1000 genomes]
rs13232879	0.85[ASN][1000 genomes]
rs13234309	0.85[ASN][1000 genomes]
rs13239553	0.89[ASN][1000 genomes]
rs13241576	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13241764	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13243480	0.89[ASN][1000 genomes]
rs13247246	0.84[ASN][1000 genomes]
rs13247386	0.85[ASN][1000 genomes]
rs17133160	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17156468	0.81[ASN][1000 genomes]
rs17156834	0.90[ASN][1000 genomes]
rs2221785	0.85[ASN][1000 genomes]
rs2237638	0.92[ASN][1000 genomes]
rs2237639	0.91[ASN][1000 genomes]
rs2237640	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2237641	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2237642	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2237644	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2283030	0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2283031	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2283032	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2283033	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2283034	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2299387	0.91[ASN][1000 genomes]
rs2299388	0.91[ASN][1000 genomes]
rs2299389	0.91[ASN][1000 genomes]
rs2299390	0.91[ASN][1000 genomes]
rs2299391	0.91[ASN][1000 genomes]
rs2299392	0.91[ASN][1000 genomes]
rs2299394	0.91[ASN][1000 genomes]
rs34147459	0.85[ASN][1000 genomes]
rs34336617	0.85[ASN][1000 genomes]
rs34356241	0.85[ASN][1000 genomes]
rs34489535	0.85[ASN][1000 genomes]
rs34833935	0.85[ASN][1000 genomes]
rs34872530	0.82[ASN][1000 genomes]
rs34958562	0.91[ASN][1000 genomes]
rs35069465	0.91[ASN][1000 genomes]
rs35093250	0.86[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35250471	0.89[ASN][1000 genomes]
rs35462289	0.85[ASN][1000 genomes]
rs35835163	0.85[ASN][1000 genomes]
rs35963743	0.85[ASN][1000 genomes]
rs3886301	0.91[ASN][1000 genomes]
rs3886302	0.91[ASN][1000 genomes]
rs4283	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57460337	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60655664	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62482263	0.85[ASN][1000 genomes]
rs62482264	0.83[ASN][1000 genomes]
rs62482265	0.85[ASN][1000 genomes]
rs62482289	0.91[ASN][1000 genomes]
rs62482298	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62482324	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62482325	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62482327	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6944294	0.85[ASN][1000 genomes]
rs6944413	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6949057	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6964054	0.85[ASN][1000 genomes]
rs6977666	0.85[ASN][1000 genomes]
rs6979719	0.85[ASN][1000 genomes]
rs71558655	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs71558656	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71558657	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71558658	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7777395	0.91[ASN][1000 genomes]
rs7784567	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7784979	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7784991	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7791035	0.89[ASN][1000 genomes]
rs7791481	0.89[ASN][1000 genomes]
rs7794946	0.91[ASN][1000 genomes]
rs7800597	0.89[ASN][1000 genomes]
rs7803462	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7807415	0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7809688	0.89[ASN][1000 genomes]
rs9648931	0.89[ASN][1000 genomes]
rs9649266	0.89[ASN][1000 genomes]
rs9791408	0.91[ASN][1000 genomes]
rs9791440	0.91[ASN][1000 genomes]
rs9792001	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103498200-103519800	Weak transcription	K562	blood
2	chr7:103508800-103519400	Weak transcription	HepG2	liver

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