Variant report

Variant	rs62504693
Chromosome Location	chr8:60561809-60561810
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10107875	0.91[ASN][1000 genomes]
rs10957102	0.93[ASN][1000 genomes]
rs12234974	0.89[EUR][1000 genomes]
rs12549153	0.84[EUR][1000 genomes]
rs12549965	0.91[ASN][1000 genomes]
rs16925042	0.94[EUR][1000 genomes]
rs16925062	0.94[EUR][1000 genomes]
rs16925069	0.94[EUR][1000 genomes]
rs16925089	0.94[EUR][1000 genomes]
rs16925094	0.94[EUR][1000 genomes]
rs3857968	0.94[EUR][1000 genomes]
rs4321990	0.94[EUR][1000 genomes]
rs4342576	0.85[ASN][1000 genomes]
rs4460359	0.94[EUR][1000 genomes]
rs4501567	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4518650	0.94[EUR][1000 genomes]
rs4629854	0.84[EUR][1000 genomes]
rs4737547	0.85[ASN][1000 genomes]
rs56188656	0.94[EUR][1000 genomes]
rs57310682	0.94[EUR][1000 genomes]
rs60064130	0.94[EUR][1000 genomes]
rs62504688	0.94[EUR][1000 genomes]
rs62504689	0.94[EUR][1000 genomes]
rs6471795	0.83[ASN][1000 genomes]
rs6982265	0.91[ASN][1000 genomes]
rs6983204	0.85[ASN][1000 genomes]
rs6990562	0.94[EUR][1000 genomes]
rs6990717	0.90[ASN][1000 genomes]
rs6996733	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7003175	0.94[EUR][1000 genomes]
rs7008068	0.91[ASN][1000 genomes]
rs7014422	0.85[ASN][1000 genomes]
rs72655569	0.94[EUR][1000 genomes]
rs72655570	0.92[EUR][1000 genomes]
rs72655578	0.94[EUR][1000 genomes]
rs7814268	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7828085	0.85[ASN][1000 genomes]
rs7828435	0.87[ASN][1000 genomes]
rs7842002	0.94[EUR][1000 genomes]
rs9643511	0.94[EUR][1000 genomes]
rs9792187	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030564	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv539630	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60561200-60563000	Weak transcription	Pancreatic Islets	Pancreatic Islet

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